New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2871432 = | 47 (0.870) | 4 (0.080) | 3/250 | NT | 8.1% | coding (210/657 nt) | PP_2524 | HD domain‑containing protein |
? | NC_002947 | 2871471 = | 46 (0.900) | coding (249/657 nt) | PP_2524 | HD domain‑containing protein |
TTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGA > NC_002947/2871323‑2871617 | tgtcagcggttcgaaccccgccgagtaactgtgtgttttgatcgcatgcactacctgctcaacacgcccactcggccagcccatctcagcaaggactgatgcagccttgTTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAAc > 5:95712‑M1/110‑149 (MQ=255) tcagcggttcgaaccccgccgagtaactgtgtgttttgatcgcatgcactacctgctcaacacgcccactcggccagcccatctcagcaaggactgatgcagccttgTTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACaa > 6:188891‑M1/108‑149 (MQ=255) tgtgGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCa < 4:144449/149‑1 (MQ=255) tgGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCAt > 4:160515/1‑148 (MQ=255) tgGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCAt > 4:155393/1‑148 (MQ=255) gggTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCa < 6:327889/149‑1 (MQ=255) gaaccccgccgagtaactgtgtgttttgatcgcatgcactacctgctcaacacgcccactcggccagcccatctcagcaaggactgatgcagccttgTTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACaa < 8:194389‑M1/42‑1 (MQ=255) gaaccccgccgagtaactgtgtgttttgatcgcatgcactacctgctcaacacgcccactcggccagcccatctcagcaaggactgatgcagccttgTTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACaa > 7:194389‑M1/98‑139 (MQ=255) ggTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCa < 6:316175/148‑1 (MQ=255) ggTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCa < 8:209843/148‑1 (MQ=255) gTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGt < 8:249604/149‑1 (MQ=255) tGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTg < 8:317626/149‑1 (MQ=255) gcgcACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGc > 7:32705/1‑149 (MQ=255) cACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTga < 1:54091/149‑1 (MQ=255) aGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTCCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTgg > 6:342210/1‑149 (MQ=255) gCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGc > 1:67795/1‑149 (MQ=255) cGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCAAGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGtt > 5:6314/1‑148 (MQ=255) ttGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGc < 3:48142/129‑1 (MQ=255) ttGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGc > 4:48142/1‑129 (MQ=255) ttGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAg > 3:91471/1‑149 (MQ=255) ttGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGAATTCGCCGTTACGTGGGCAGGCCTCGAAGTTGTCGGCGAAAAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAg > 5:145727/1‑149 (MQ=255) aTCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGt < 6:318764/149‑1 (MQ=255) gctttcGGCGACGGTGGTGCACGACTGTGGGGCGGTGGAAAAGCATGCGCCGTTACGTGGGCAGGCCTCGACGTTTTCGGCGATCATGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGATCAGGTAGTGc < 6:6314/146‑1 (MQ=255) cttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATg < 3:160515/148‑1 (MQ=255) cttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATg < 3:155393/148‑1 (MQ=255) ttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGc > 8:186465/1‑148 (MQ=255) ttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGc > 3:25106/1‑148 (MQ=255) cggcgACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATc < 4:91471/149‑1 (MQ=255) aCGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCaaaa > 4:168548/1‑148 (MQ=255) tgcACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAacaca > 4:4345/1‑145 (MQ=255) tgcACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAacaca < 3:4345/145‑1 (MQ=255) tgcACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGt > 6:128606/1‑149 (MQ=255) aCGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTAc < 5:342210/149‑1 (MQ=255) aCGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGCCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGAGGGCGTGTTGAGCAGGTAGTCCATGCGATCAAAACACACAGTTa > 1:146424/1‑148 (MQ=255) aaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATg > 5:285813/1‑109 (MQ=255) aaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATg < 6:285813/109‑1 (MQ=255) aaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCt < 8:32705/149‑1 (MQ=255) aaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCt > 4:162251/1‑149 (MQ=255) aaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCt > 2:330264/1‑149 (MQ=255) ttgttcgccgacaacgtcgaggcctgcccacgtaacggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTc < 8:194389‑M2/97‑1 (MQ=255) ttgttcgccgacaacgtcgaggcctgcccacgtaacggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTc > 7:194389‑M2/43‑139 (MQ=255) ttgttcgccgacaacgtcgaggcctgcccacgtaacggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGa > 6:188891‑M2/43‑149 (MQ=255) gttcgccgacaacgtcgaggcctgcccacgtaacggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGaca > 5:95712‑M2/41‑149 (MQ=255) aTTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGaca > 4:89834/1‑149 (MQ=255) CGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGt < 8:152727‑M1/149‑1 (MQ=255) CGTTTCGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAg < 3:94126‑M1/149‑1 (MQ=255) ggCAGGCCTCGACGGTGTCGGCGAACAAGGCTGCATCAGTCCTGGCTGAGATGCGCTGGCCGAGTGGGCGTGGTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTGCGAACCGCTGACACGTGAGGCCTGCATc < 3:187601/149‑1 (MQ=255) aGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCtt < 4:25106/149‑1 (MQ=255) gCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCa < 7:186465/149‑1 (MQ=255) gCCTCGACGTTGGCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGTCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCa < 6:145727/149‑1 (MQ=255) ccTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCTATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAg < 2:67795/149‑1 (MQ=255) ccTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAg < 3:89834/149‑1 (MQ=255) cTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAg > 2:292006/1‑148 (MQ=255) cTCGAAGTTGTAGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGAAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAg > 7:119340/1‑148 (MQ=255) gACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGc > 8:173760/1‑132 (MQ=255) gACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGc < 7:173760/132‑1 (MQ=255) gTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGt > 8:171522/1‑148 (MQ=255) tCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCg < 1:330264/149‑1 (MQ=255) ccaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGTCCGGCtt < 6:95712‑M2/145‑1 (MQ=255) aaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGa < 3:162251‑M2/147‑1 (MQ=255) | TTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGA > NC_002947/2871323‑2871617 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |