New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2872062 =	53 (0.980)	3 (0.060)	3/256	NT	5.5%	coding (1013/1164 nt)	PP_2525	hypothetical protein
	?	NC_002947	2872099 =	51 (0.980)					coding (976/1164 nt)	PP_2525	hypothetical protein

CTTGGCGCGGCTGATCATTCGTGCATCACGCCGTAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2872100‑2872062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGGGTGCCGTCCGACAATTCAGCACCCTCGAGCGGGCGCAAAA  >  NC_002947/2872099‑2872245                                                                                                                                                                                            CTTGGCGCGGCTGATCATTCGTGCATCACGCCGTAGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGG                                          <  7:221424/146‑1 CTTGGCGCGGCTGATCATTCGTGCATCACGCCGTAGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGG                                          >  8:221424/1‑146  TTGGCGCGGCTGATCATTCGTGCATCACGCCGTAGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGGGTGC                                      >  7:72210/1‑149                                      CAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGGGTGCCGTCCGACAATTCAGCACCCTCGAGCGGGCGCAAAA  <  2:178902/149‑1                                                                                                                                                                                            CTTGGCGCGGCTGATCATTCGTGCATCACGCCGTAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2872100‑2872062 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAGGGTGCCGTCCGACAATTCAGCACCCTCGAGCGGGCGCAAAA  >  NC_002947/2872099‑2872245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.