| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2872062 = | 53 (0.980) | 3 (0.060) | 3/256 | NT | 5.5% | coding (1013/1164 nt) | PP_2525 | hypothetical protein |
| ? | NC_002947 | 2872099 = | 51 (0.980) | coding (976/1164 nt) | PP_2525 | hypothetical protein | |||||
TCAGCCCAACGCCACAGCGGCTCATCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAG > NC_002947/2871915‑2872204 | ttttgcgcccgctcgagggtgctgaattgtcggacggcaccctgcgttatcttctgctgatggccgccctgctcacaccacggccgccatcgctgatggtgttgaacgaaccggaaaccagtctgcacgcggacctgctcccggcctTg < 2:178902‑M1/2‑1 (MQ=255) aCGCCACAGCGGCTCATCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGc < 7:167868/149‑1 (MQ=255) acaGCGGCTCATCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGAt < 5:22845/149‑1 (MQ=255) aTCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGa > 6:72531/1‑149 (MQ=255) tCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGAt > 5:93662/1‑149 (MQ=255) ccAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGAt > 5:158257/1‑148 (MQ=255) cAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCa < 5:72531/149‑1 (MQ=255) aGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTgg > 3:173083/1‑123 (MQ=255) aGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTgg < 4:173083/123‑1 (MQ=255) aGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCg > 5:74067/1‑131 (MQ=255) aGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCg < 6:74067/131‑1 (MQ=255) aacccCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCAAGCAAATTGCACCCGTCACAGGCTGCCAGCGCGTAGATTAATGGCGCACTGTGCCATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGcc > 3:301443/1‑148 (MQ=255) gcaccctgcgttatcttctgctgatggccgccctgctcacaccacggccgccatcgctgatggtgttgaacgaaccggaaaccagtctgcacgcggacctgctcccggcctTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCaa > 7:72210‑M1/112‑149 (MQ=255) cctgcgttatcttctgctgatggccgccctgctcacaccacggccgccatcgctgatggtgttgaacgaaccggaaaccagtctgcacgcggacctgctcccggcctTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAg < 7:221424‑M1/39‑1 (MQ=255) cctgcgttatcttctgctgatggccgccctgctcacaccacggccgccatcgctgatggtgttgaacgaaccggaaaccagtctgcacgcggacctgctcccggcctTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAg > 8:221424‑M1/108‑146 (MQ=255) cAGCTGGGTTTTCCCTTGTAGTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGa < 6:147912/149‑1 (MQ=255) cAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGa < 3:33868/149‑1 (MQ=255) ccTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTg > 3:274371/1‑149 (MQ=255) cTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTg > 1:334990/1‑148 (MQ=255) gTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCaa < 4:4020/124‑1 (MQ=255) gTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCaa > 3:4020/1‑124 (MQ=255) ttttttCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTg < 6:158257/149‑1 (MQ=255) aGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCgg > 3:114016/1‑149 (MQ=255) tctAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGgttc < 6:93662/149‑1 (MQ=255) tAGCACATTGCACCAGTAACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACTAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGgttc < 4:301443/147‑1 (MQ=255) aGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCg < 5:60547/142‑1 (MQ=255) aGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCg > 6:60547/1‑142 (MQ=255) gCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGcc > 1:150092/1‑104 (MQ=255) gCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGcc < 2:150092/104‑1 (MQ=255) gCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGgttcgtt > 6:165478/1‑148 (MQ=255) acaTTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATA‑CACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCATACTGGTTTCCGGTTCGTTCAac < 7:209554/149‑1 (MQ=255) aCCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCAt > 6:147088/1‑148 (MQ=255) gCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATggcgg > 5:21740/1‑149 (MQ=255) cAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGCTCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCgtg > 8:91545/1‑149 (MQ=255) gcgcGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCgtggt < 5:106433/149‑1 (MQ=255) cgTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGtgtg < 8:262470/149‑1 (MQ=255) ttAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAgg > 3:175881/1‑149 (MQ=255) aTGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGggcg > 7:35728/1‑149 (MQ=255) tGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGggcgg > 5:73588/1‑149 (MQ=255) tGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGggcgg > 8:99336/1‑149 (MQ=255) cACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATc < 6:21740/149‑1 (MQ=255) cTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGa > 6:325877/1‑67 (MQ=255) cTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGa < 5:325877/67‑1 (MQ=255) tgtgCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATcag > 2:313035/1‑148 (MQ=255) gCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATcagcag > 5:297387/1‑148 (MQ=255) cGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCagaa < 5:165478/149‑1 (MQ=255) cGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCaga < 2:334990/148‑1 (MQ=255) gATACCACCCATACCTGGATACGGCGTGATGCACGAATGATCAGCCGCGACAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATTGCGGCCGAGGTGTGAGCAGGGCGGCCATCAGCagaag < 6:39068/149‑1 (MQ=255) tACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCagaaga > 4:6025/1‑148 (MQ=255) accCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGggcgg < 7:71881/130‑1 (MQ=255) accCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACg > 5:200245/1‑149 (MQ=255) accCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCAGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGggcgg > 8:71881/1‑130 (MQ=255) cccAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATc < 7:241795/134‑1 (MQ=255) cccAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATc > 8:241795/1‑134 (MQ=255) cccAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACg > 4:8530/1‑148 (MQ=255) ccAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACg > 1:178902/1‑147 (MQ=255) ccAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCa < 6:200245/149‑1 (MQ=255) cAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAg < 4:114016/149‑1 (MQ=255) cAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAg < 6:73588/149‑1 (MQ=255) aaaCCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATgg > 8:126376/1‑103 (MQ=255) aaaCCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATgg < 7:126376/103‑1 (MQ=255) | TCAGCCCAACGCCACAGCGGCTCATCCAGCAACCCAACCCCCCGCAGCTGGGTTTGCCCTTGTATTTTTTCCAGCTCTAGCACATTGCACCCGTCACAGGCTGCCAGCGCGTTGATTAATGGCGCACTGTGCGATACCACCCAAACCTGGCTACGGCGTGATGCACGAATGATCAGCCGCGCCAAGGCCGGGAGCAGGTCCGCGTGCAGACTGGTTTCCGGTTCGTTCAACACCATCAGCGATGGCGGCCGTGGTGTGAGCAGGGCGGCCATCAGCAGAAGATAACGCAG > NC_002947/2871915‑2872204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |