New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2988836 = | 31 (0.580) | 6 (0.110) | 6/256 | NT | 14.4% | coding (506/951 nt) | PP_2613 | hypothetical protein |
? | NC_002947 | 2988881 = | 41 (0.790) | coding (461/951 nt) | PP_2613 | hypothetical protein |
GCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2988987‑2988836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggct‑‑GCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCA > NC_002947/2988881‑2988988 GCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTG > 6:265133/1‑149 CGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGC > 3:303336/1‑149 CGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGC > 5:175268/1‑149 CCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCTTGGCCCGGTGTCTCGGT‑TGGCATGGCGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGT > 5:3176/1‑149 TGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑‑‑‑‑‑‑TGGCCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGC > 1:120653/1‑149 CACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCTTGGCCCGGTGTCTCGGT‑TGGCATGGCGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGC < 6:3176/149‑1 TCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑GCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGC > 7:273119/1‑148 GCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑GCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCG > 7:281555/1‑149 TGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑GCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCA < 8:281555/149‑1 GCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2988987‑2988836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggct‑‑GCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCA > NC_002947/2988881‑2988988 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |