New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3072608	53 (0.980)	6 (0.120)	6/250	NT	10.7%	coding (314/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3072637	50 (0.980)					coding (343/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator

CGGTATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072456‑3072608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggcTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCGG  <  NC_002947/3072637‑3072494                                                                                                                                                                                                                                                                                                              CGGTATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGCAGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTG                                                                                                                                                       >  1:84708/1‑149  GGTATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCA                                                                                                                                                     <  4:104721/149‑1  GGTATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTG                                                                                                                                                       >  5:95381/1‑147     ATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGC                                                                                                                                                  >  4:67386/1‑149        TTCCAGGCCAGCCTTCAGGTCGGCATGCGTGCCGCCAACCACCAGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGC                                                                                                                                                  <  1:114653/148‑1              GCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCAC                                                                                                                                         >  8:296948/1‑149                     TTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCACGGGCGAG                                                                                                                                  >  4:175762/1‑149                           ACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCACGGGCGAGCACCGC                                                                                                                            >  5:33070/1‑149                                          CCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAA                                                                                                             <  7:296948/149‑1                                           CAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAAC                                                                                                            <  3:175762/149‑1                                                  CGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTC                                                                                                       <  6:33070/149‑1                                                                                                                                                       GCAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCG   >  7:243902/1‑149                                                                                                                                                        CAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCGG  >  3:67386/1‑149                                                                                                                                                        CAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCGG  >  7:241552/1‑149                                                                                                                                                        CAGGCTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCG   <  1:26532/148‑1                                                                                                                                                                                                                                                                                                              CGGTATTTTCCAGGCCAGCCTTCAGGACGGCATGCGTGCCGCCAAC‑‑CCGGC‑GCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072456‑3072608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggcTGTGCTCACGGGCGAGCACCGCGGTAATGGCCTGCAACTCCTCGGCACCGCCATCAAACAGGTTGGCGGCCAGGTCAGTCAGGGAAAACAGCACCGCTTGCGGGTCGTCATAGCCGAGCATGCGCGCCAGCGCCGGGTTGGCGG  <  NC_002947/3072637‑3072494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.