New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3072608	53 (0.980)	6 (0.120)	6/250	NT	10.7%	coding (314/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3072637	50 (0.980)					coding (343/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator

CGTGCCGCCAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTGGCCCAGCAGCGCCT  >  NC_002947/3072490‑3072785                                                                                                                                                    |                                                                                                                                                     cGTGCCGCCAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGcaca                                                                                                                                                      <  5:86322/148‑1 (MQ=255)     ccgccAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctg                                                                                                                                                 >  3:67386‑M2/1‑144 (MQ=255)     ccgccAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctg                                                                                                                                                 >  7:241552‑M2/1‑144 (MQ=255)      cgccAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctgc                                                                                                                                                >  7:243902‑M2/1‑143 (MQ=255)      cgccAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctg                                                                                                                                                 <  1:26532‑M2/148‑6 (MQ=255)          aaCCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACgg                                                                                                                                            >  3:115612/1‑149 (MQ=255)             ccGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTCAGCACAGCCTGCACGGCTa                                                                                                                                         >  8:33502/1‑149 (MQ=255)                  gcTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGaaa                                                                                                                                    >  6:132160/1‑149 (MQ=255)                   cTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   <  4:115612/149‑1 (MQ=255)                   cTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   <  4:221996/149‑1 (MQ=255)                             tGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTgcgg                                                                                                                         >  7:225586/1‑149 (MQ=255)                                tCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTgcggcg                                                                                                                       >  8:147730/1‑148 (MQ=255)                                  ggCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGGACGGCTACGAAACCCGTCTGCGGCGCaa                                                                                                                    <  1:191166/149‑1 (MQ=255)                                  ggCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCaa                                                                                                                    <  7:147730/149‑1 (MQ=255)                                   gCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAg                                                                                                                   >  5:170869/1‑149 (MQ=255)                                         acgacCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACgg                                                                                                              <  6:2722/148‑1 (MQ=255)                                          cgacCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCa                                                                                                            <  6:170869/149‑1 (MQ=255)                                             cccGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGcc                                                                                                         <  6:95381/149‑1 (MQ=255)                                                gCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCAtc                                                                                                      >  1:205169/1‑149 (MQ=255)                                                  aaGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCAtctc                                                                                                    <  1:19169/149‑1 (MQ=255)                                                  aaGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCAtctc                                                                                                    <  2:26532/149‑1 (MQ=255)                                                     cGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGAt                                                                                                 <  2:12126/149‑1 (MQ=255)                                                       gTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGAtgt                                                                                               >  5:193369/1‑149 (MQ=255)                                                          cTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   <  8:91675/110‑1 (MQ=255)                                                          cTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   >  7:91675/1‑110 (MQ=255)                                                          cTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGc                                                                                             <  1:195860/148‑1 (MQ=255)                                                          cTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGc                                                                                             <  6:141013/148‑1 (MQ=255)                                                           tGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCt                                                                                            >  3:202901/1‑148 (MQ=255)                                                             ttttCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCtga                                                                                          <  6:203262/148‑1 (MQ=255)                                                                  ccTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAAcc                                                                                    >  5:165436/1‑149 (MQ=255)                                                                  ccTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAAc                                                                                     <  5:132160/148‑1 (MQ=255)                                                                  ccTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAAc                                                                                     <  6:114957/148‑1 (MQ=255)                                                                   ctgactgaCCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   <  6:245758/101‑1 (MQ=255)                                                                   ctgactgaCCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAAc                                                                                                                                   >  5:245758/1‑101 (MQ=255)                                                                     gactgacCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACctgc                                                                                 >  1:252358/1‑149 (MQ=255)                                                                      actgacCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACctg                                                                                  <  2:205169/147‑1 (MQ=255)                                                                        tgacCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCAc                                                                                                                                              >  3:78654/1‑85 (MQ=255)                                                                        tgacCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCAc                                                                                                                                              <  4:78654/85‑1 (MQ=255)                                                                                   cctaCCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGTTGCTCGCCCGTGAGCACAGCCTGAACGGCTACGAAACCCGTCTGCTGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGc                                                                   <  7:33502/146‑1 (MQ=255)                                                                                      aCCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAAGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCAt                                                                >  1:269646/1‑149 (MQ=255)                                                                                        cTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATg                                                               >  4:200004/1‑148 (MQ=255)                                                                                         tGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATg                                                               >  3:51453/1‑147 (MQ=255)                                                                                           tttGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAgg                                                           >  6:325979/1‑149 (MQ=255)                                                                                           tttGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAg                                                            <  4:202901/148‑1 (MQ=255)                                                                                             tGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGc                                                         >  8:231264/1‑149 (MQ=255)                                                                                                  gCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCtggtg                                                    >  1:331311/1‑149 (MQ=255)                                                                                                         cGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGt                                             <  8:225586/149‑1 (MQ=255)                                                                                                          gaggagTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccg                                            <  6:33070‑M2/149‑107 (MQ=255)                                                                                                               gTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccgggttg                                       <  3:175762‑M2/149‑112 (MQ=255)                                                                                                               gTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCAGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCg                                       >  1:284370/1‑149 (MQ=255)                                                                                                                ttGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccgggttgg                                      <  7:296948‑M2/149‑113 (MQ=255)                                                                                                                   cAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGa                                   >  6:274089/1‑149 (MQ=255)                                                                                                                          ttACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTAcc                            <  2:84708/149‑1 (MQ=255)                                                                                                                             ccGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAgg                                                >  4:171787/1‑126 (MQ=255)                                                                                                                             ccGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGaa                         >  3:278881/1‑149 (MQ=255)                                                                                                                              cgcgGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAAc                        >  8:95643/1‑149 (MQ=255)                                                                                                                               gcgGTGCTCGCCCGTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccgggttggcggcacgcatgccgt                       >  5:33070‑M2/1‑22 (MQ=255)                                                                                                                                     cTCGCCCGTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccgggttggcggcacgcatgccgtcctgaa                 >  4:175762‑M2/1‑16 (MQ=255)                                                                                                                                      tCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTg                >  8:103299/1‑149 (MQ=255)                                                                                                                                       cGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAggg                                               >  4:196898/1‑117 (MQ=255)                                                                                                                                       cGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAggg                                               <  3:196898/117‑1 (MQ=255)                                                                                                                                            gTGAGCACAgcctgcaactcctcggcaccgccatcaaacaggttggcggccaggtcagtcagggaaaacagcaccgcttgcgggtcgtcatagccgagcatgcgcgccagcgccgggttggcggcacgcatgccgtcctgaaggctggc          >  8:296948‑M2/1‑9 (MQ=255)                                                                                                                                             tGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTGGCCcagc         <  8:197703/149‑1 (MQ=255)                                                                                                                                               aGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTGGCCcagca        <  6:165436/148‑1 (MQ=255)                                                                                                                                                    aGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTGGCCCAGCAGCGCCt  <  3:200004/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGTGCCGCCAACCCGGCGCTGGCGCGCATGCTCGGCTATGACGACCCGCAAGCGGTGCTGTTTTCCCTGACTGACCTGGCCGCCAACCTGTTTGATGGCGGTGCCGAGGAGTTGCAGGCCATTACCGCGGTGCTCGCCCGTGAGCACAGCCTGCACGGCTACGAAACCCGTCTGCGGCGCAAGGACGGCAGCCATCTCGATGTGCTGATGAACCTGCTGCTCAAACCCGGCCATGAAGGGCTGGTGGAGGGGTTTGTCGCCGACATTACCGAACGCAAGCTGGCCCAGCAGCGCCT  >  NC_002947/3072490‑3072785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.