New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3296377 =	52 (0.970)	3 (0.060)	3/244	NT	6.1%	intergenic (‑246/+6)	PP_2896/PP_2898	hypothetical protein/hypothetical protein
	?	NC_002947	3296441 =	44 (0.880)					coding (434/492 nt)	PP_2898	hypothetical protein

GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3296532‑3296377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCG  >  NC_002947/3296441‑3296584                                                                                                                                                                                                                                                                                                              GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCATGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATT                                                                                                                                                          <  1:118780/148‑1  CCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGA                                                                                                                                                        <  5:116019/149‑1     ACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGG                                                                                                                                                     >  5:270983/1‑149      CCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGG                                                                                                                                                    >  7:49245/1‑149      CCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGG                                                                                                                                                    >  7:71521/1‑149       CAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGT                                                                                                                                                   <  7:317157/149‑1                                                                                             CACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCT                                                             >  1:243110/1‑149                                                                                              ACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAACCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTG                                                            >  1:14067/1‑149                                                                                               CCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGG                                                           >  8:296901/1‑149                                                                                                                                                    TGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTG      >  5:346104/1‑149                                                                                                                                                     GAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAG                  <  3:157233/136‑1                                                                                                                                                     GAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAG                  >  4:157233/1‑136                                                                                                                                                        GGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCG  >  1:66845/1‑149                                                                                                                                                                                                                                                                                                              GCCGACCAGGTCATCGGCCAGCGCAACGGCCAGCCGTTGCACGCGCTGTGCCTGCTGGTCGATTGGCGCACGTTGCCGCCGAGCATGCGCGCCACCCCTCAAGCCTATCTGGGTAGCGCCAGTTTGCTGAGCAGCTACCCGTGCGATTGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3296532‑3296377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgaggggtgGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCG  >  NC_002947/3296441‑3296584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.