New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3296377 =	52 (0.970)	3 (0.060)	3/244	NT	6.1%	intergenic (‑246/+6)	PP_2896/PP_2898	hypothetical protein/hypothetical protein
	?	NC_002947	3296441 =	44 (0.880)					coding (434/492 nt)	PP_2898	hypothetical protein

GGCGGCATATGGGTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGA  >  NC_002947/3296233‑3296519                                                                                                                                                 |                                                                                                                                               cgaccaggcacagccactgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCAccc                                                                                                                                            >  1:66845‑M1/145‑149 (MQ=255)     gcATATGGGTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCa                                                                                                                                        <  7:219238/149‑1 (MQ=255)     caggcacagccactgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCACCCCTCa                                                                                                                                        >  5:346104‑M1/141‑149 (MQ=255)         atGGGTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCg                                                                                                                                    >  8:260290/1‑149 (MQ=255)            ggTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCCCAATCGCa                                                                                                                                  <  8:99951/148‑1 (MQ=255)            ggTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCCCAATCGCa                                                                                                                                  >  7:99951/1‑148 (MQ=255)                gggggTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACggg                                                                                                                              >  8:66138/1‑148 (MQ=255)                 ctgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCACCCCTc                                                                                                                                         >  4:157233‑M1/129‑136 (MQ=255)                 ctgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCACCCCTc                                                                                                                                         <  3:157233‑M1/8‑1 (MQ=255)                                   aaCAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGgc                                                                                                          >  3:299916/1‑149 (MQ=255)                                    aCAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGgc                                                                                                          <  1:177757/148‑1 (MQ=255)                                    aCAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGCCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGgc                                                                                                          >  2:177757/1‑148 (MQ=255)                                             gcaggcagCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCaaa                                                                                                               >  4:231676/1‑134 (MQ=255)                                             gcaggcagCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCaaa                                                                                                               <  3:231676/134‑1 (MQ=255)                                              caggcagCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGa                                                                                                >  1:244718/1‑148 (MQ=255)                                                 gcagCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAgg                                                                                            >  6:21140/1‑149 (MQ=255)                                                   agCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCt                                                                                          >  7:39379/1‑149 (MQ=255)                                                      gATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGa                                                                                       <  7:260290/149‑1 (MQ=255)                                                       atatCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAg                                                                                      >  7:17816/1‑149 (MQ=255)                                                          ccaggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAgggg                                                                                   >  8:296901‑M1/88‑149 (MQ=255)                                                           caggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcggttggcgcacgttgccgccgagcatgcgcgcCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGt                                                                                  >  1:14067‑M1/87‑149 (MQ=255)                                                           cTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGt                                                                                  >  1:2302/1‑149 (MQ=255)                                                            aggtcatcggccagcgcaacggccagccgttgcacgcgctgtgcctgctggtcgattggcgcacgttgccgccgagcatgcgcgcCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTg                                                                                 >  1:243110‑M1/86‑149 (MQ=255)                                                                    tAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGgcgcgc                                                                           <  7:66138/147‑1 (MQ=255)                                                                     aGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATg                                                                        >  1:204361/1‑149 (MQ=255)                                                                        aaaTGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTc                                                                     <  2:244718/149‑1 (MQ=255)                                                                             gCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcgg                                                                <  8:17816/149‑1 (MQ=255)                                                                                     aTCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgc                                                        >  7:57317/1‑149 (MQ=255)                                                                                          gCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgcgc                                                      <  2:204361/146‑1 (MQ=255)                                                                                          gCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTgcgc                                                      <  3:203131/146‑1 (MQ=255)                                                                                           cTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcg                                                                 <  8:172922/134‑1 (MQ=255)                                                                                           cTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTcggcg                                                                 >  7:172922/1‑134 (MQ=255)                                                                                             gcgcCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTgg                                                                                >  8:78129/1‑117 (MQ=255)                                                                                             gcgcCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTgg                                                                                <  7:78129/117‑1 (MQ=255)                                                                                                  tcctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcag                                           >  2:187709/1‑149 (MQ=255)                                                                                                  tcctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcag                                           >  4:243462/1‑149 (MQ=255)                                                                                                   cctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATc                                                 <  1:29069/142‑1 (MQ=255)                                                                                                   cctGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATc                                                 >  2:29069/1‑142 (MQ=255)                                                                                                     tGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                        >  6:34228/1‑149 (MQ=255)                                                                                                     tGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                        >  8:49245/1‑149 (MQ=255)                                                                                                       gTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACcagcag                                        <  2:2302/147‑1 (MQ=255)                                                                                                       gTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAgg                                       <  3:243462/148‑1 (MQ=255)                                                                                                           ccTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGcaca                                   <  4:299916/148‑1 (MQ=255)                                                                                                             tGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAgcg                                >  6:270983/1‑149 (MQ=255)                                                                                                                 ggggCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGt                             >  8:79460/1‑148 (MQ=255)                                                                                                                 ggggCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGt                             <  7:79460/148‑1 (MQ=255)                                                                                                                          gcgATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTg                   >  1:222452/1‑149 (MQ=255)                                                                                                                            gatgatGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGAAGGCACAGCGCGTGCAACGGCTGGc                 >  4:64337/1‑149 (MQ=255)                                                                                                                              tgatgTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCg               >  6:88487/1‑149 (MQ=255)                                                                                                                                 tgtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGtt             <  5:34228/148‑1 (MQ=255)                                                                                                                                  gtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGAc                                              >  8:212908/1‑114 (MQ=255)                                                                                                                                  gtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGAc                                              <  7:212908/114‑1 (MQ=255)                                                                                                                                  gtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTgc           >  3:105403/1‑149 (MQ=255)                                                                                                                                  gtgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTgc           >  8:71521/1‑149 (MQ=255)                                                                                                                                   tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTgcg          <  8:57317/149‑1 (MQ=255)                                                                                                                                     cAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCAGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCt        >  6:29319/1‑149 (MQ=255)                                                                                                                                          ggTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg      <  3:251969/146‑1 (MQ=255)                                                                                                                                          ggTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg      >  4:251969/1‑146 (MQ=255)                                                                                                                                           gTACAGCACCCCTCAATCGCGCGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGa  >  1:48357/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                               GGCGGCATATGGGTTGGGGGTTGTAGCTTCGGTGAACAGGATTTGCAGGCAGCGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGA  >  NC_002947/3296233‑3296519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.