New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3464991	60 (1.110)	3 (0.060)	3/256	NT	5.5%	coding (804/1062 nt)	aroF‑II	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
	?	NC_002947	= 3465038	44 (0.840)					coding (757/1062 nt)	aroF‑II	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase

CAGCCATCGAACAAGTGCCCTTCGATCATGACGCCGACCAACGAACGGTCGCCGGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3464842‑3464991 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGCACGGATCATGGTCGATTGCAGCCACGCCAACAGCGGCAAGGACCCGGCGCGCCAGCCAGCGGTCTTCAATGATGTGCTGGAACAGCGCCTGGCCGGC  <  NC_002947/3465038‑3464892                                                                                                                                                                                                                                                                                                           CAGCCATCGAACAAGTGCCCTTCGATCATGACGCCGACCAACGAACGGTCGCCGGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGC                                                                                                                                                      <  6:229229/149‑1  AGCCATCGAACAAGTGCCCTTCGATCATGACGCCGACCAACGAACGGTCGCCGGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCC                                                                                                                                                     >  2:237888/1‑149      ATCGAACAAGTGCCCTTCGATCATGACGCCGACCAACGAACGGTCGCCGGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCCAA                                                                                                                                                   >  4:203226/1‑147                                                      GGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCCAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGCAC                                                                                                 <  3:203226/149‑1                                                                                          TGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCCAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGC                                                                                                   <  5:195537/111‑1                                                                                          TGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCCAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGC                                                                                                   >  6:195537/1‑111                                                                                                                                                     CCAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGCACGGATCATGGTCGATTGCAGCCACGCCAACAGCGGCAAGGACCCGGCGCGCCAGCCAGCGGTCTTCAATGATGTGCTGGAACAGCGCCTGGCCGGC  >  2:7095/1‑149                                                                                                                                                     CCAACAGCATCGCCATGGACCGACAGGCGTTGGCCAAGGCCGGTCTGCAGGCACGGATCATGGTCGATTGCAGCCACGCCAACAGCGGCTAGGACCCGGCGCTCCAGCCAGCGGTCTTCAATGATGTGCTGGAACAGCGCCTGGCCGGC  <  8:132785/149‑1                                                                                                                                                                                                                                                                                                           CAGCCATCGAACAAGTGCCCTTCGATCATGACGCCGACCAACGAACGGTCGCCGGCCAGGCGCTGTTCCAGCACATCATTGAAGACCGCTGGCTGGCGCGCCGGGTCCTTGCCGCTGTTGGCGTGGCTGCAATCGACCATGATCCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3464842‑3464991 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAACAGCATCGCCATGGCCCGCCAGGCGTTGGCCAAGGCCGGTCTGCAGGCACGGATCATGGTCGATTGCAGCCACGCCAACAGCGGCAAGGACCCGGCGCGCCAGCCAGCGGTCTTCAATGATGTGCTGGAACAGCGCCTGGCCGGC  <  NC_002947/3465038‑3464892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.