| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3586021 = | 43 (0.800) | 3 (0.060) | 3/252 | NT | 7.1% | coding (215/1329 nt) | benK | benzoate MFS transporter |
| ? | NC_002947 | 3586062 = | 38 (0.740) | coding (256/1329 nt) | benK | benzoate MFS transporter | |||||
CAGCCCAGGCCGGCGATGAAGCGGTAGATGCCAAACTCGCTCGGGTTGCTGGCAAAGCCATTGAGGATGGTCGCCCCCGAGAACAAGGCGAAACAGATGGCAATGCCCTTCTTGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3586174‑3586021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATG > NC_002947/3586062‑3586208 CAGCCCAGGCCGGCGATGAAGCGGTAGATGCCAAACTCGCTCGGGTTGCTGGCAAAGCCATTGAGGATGGTCGCCCCCGAGAACAAGGCGAAACAGATGGCAATGCCCTTCTTGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAG > 8:302514/1‑149 CCCAGGCCGGCGATGAAGCGGTAGATGCCAAACTCGCTCGGGTTGCTGGCAAAGCCATTGAGGATGGTCGCCCCCGAGAACAAGGCGAAACAGATGGCAATGCCCTTCTTGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGC > 5:227531/1‑149 TTCTTGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCG > 3:186732/1‑149 TGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCT > 7:236379/1‑149 GCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTG > 6:256877/1‑149 GCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGA > 7:95905/1‑149 CGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGAT < 7:209891/149‑1 CAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATG < 8:14067/149‑1 CAGCCCAGGCCGGCGATGAAGCGGTAGATGCCAAACTCGCTCGGGTTGCTGGCAAAGCCATTGAGGATGGTCGCCCCCGAGAACAAGGCGAAACAGATGGCAATGCCCTTCTTGCGCCCGATGCGGTCGGCCAGGCTGCCGAAGGCCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3586174‑3586021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTC‑GGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATG > NC_002947/3586062‑3586208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |