| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3792154 = | 58 (1.080) | 4 (0.080) | 3/250 | NT | 6.9% | coding (1164/1755 nt) | PP_3354 | acyl‑CoA dehydrogenase |
| ? | NC_002947 | 3792203 = | 53 (1.040) | coding (1115/1755 nt) | PP_3354 | acyl‑CoA dehydrogenase | |||||
ACCTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3792305‑3792154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGGG > NC_002947/3792203‑3792350 ACCTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCG > 4:254424/1‑149ACCTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTAATGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCG > 5:240049/1‑149 CTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGC > 3:122193/1‑146 CTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGC < 4:122193/146‑1 GCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGC < 3:17897/90‑1 GCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGC > 4:17897/1‑90 CCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGG > 5:164223/1‑149 CCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGG > 6:241315/1‑149 CGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGCCCCGACGCATGGCCGGGT > 7:236911/1‑149 ACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGC < 5:241315/149‑1 CGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGG < 2:3843/149‑1 CGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGG < 8:311800/149‑1 GTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGGG > 1:139315/1‑149 ACCTGCACCCGGCCATGCGTCGGGTCTTGCTGGAGTTGCGGGTGCGTACCGAGGGGATGCGCGCGCTGGCCTACTGGACGGCCCAGTGGCTGGATATCGCCGACGCCGCCGTCGAGCCTGCACAACGGGCGAAGGCTGCGACATTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3792305‑3792154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGGG > NC_002947/3792203‑3792350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |