New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3792154 =	58 (1.080)	4 (0.080)	3/250	NT	6.9%	coding (1164/1755 nt)	PP_3354	acyl‑CoA dehydrogenase
	?	NC_002947	3792203 =	53 (1.040)					coding (1115/1755 nt)	PP_3354	acyl‑CoA dehydrogenase

CTCCTGGGTGTAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGGG  >  NC_002947/3792055‑3792350                                                                                                                                                       |                                                                                                                                                    cTCCTGGGTGTAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGt                                                                                                                                                     <  5:300046/149‑1 (MQ=255)  tCCTGGGTGTAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGAGCAGGCTCGACGGCGGCGTc                                                                                                                                                    >  3:236081/1‑149 (MQ=255)   gcacccggccatgcgtcgggtcttgctggagttgcgggtgcgtaccgaggggatgcgcgcgctggcctactggacggcccagtggctggatatcgccgaCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGt                                                                                                                                                     <  5:241315‑M1/50‑1 (MQ=255)    cTGGGTGTAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCgg                                                                                                                                                  >  6:201576/1‑149 (MQ=255)     acccggccatgcgtcggggcttgctggagttgcgggtgcgtaccgaggggatgcgcgcgctggcctactggacggcccagtggctggatatcgccgaCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCg                                                                                                                                                   >  7:236911‑M1/98‑149 (MQ=255)      cccggccatgcgtcgggtcttgctggagttgcgggtgcgtaccgaggggatgcgcgcgctggcctactggacggcccagtggctggatatcgccgaCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCgg                                                                                                                                                  >  6:241315‑M1/97‑149 (MQ=255)      cccggccatgcgtcgggtcttgctggagttgcgggtgcgtaccgaggggatgcgcgcgctggcctactggacggcccagtggctggatatcgccgaCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCgg                                                                                                                                                  >  5:164223‑M1/97‑149 (MQ=255)          gtAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGatat                                                                                                                                            >  6:270208/1‑149 (MQ=255)             gccatagccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGCAGCTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCCACGGCGGCGTCGGCGATATc                                                                                                                                           >  1:271232/1‑149 (MQ=255)              ccatagccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAg                                                                                                                                        >  7:41020/1‑149 (MQ=255)               catagccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGc                                                                                                                                       >  7:184808/1‑149 (MQ=255)                atagccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGcc                                                                                                                                      <  6:77426/149‑1 (MQ=255)                  agccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCAc                                                                                                                                    >  4:260851/1‑149 (MQ=255)                   gccaCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCAc                                                                                                                                    <  4:236081/148‑1 (MQ=255)                      aCCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTggg                                                                                                                                >  6:336381/1‑149 (MQ=255)                         cAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCg                                                                                                                             >  4:196562/1‑149 (MQ=255)                               cTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAg                                                                                                                        >  2:121160/1‑148 (MQ=255)                                 gctaGGCCTTGCTTGCATGGCTTAACCCCTGCTCGGTGAAGGCGGC‑‑TTTGAGGATGGGGTTCAAATGCGCCGCCAATGTCTCTGCCTTCGCCGGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTa                                                                                                                      <  4:21946/145‑1 (MQ=255)                                 gCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAg                                                                                                                        >  3:21946/1‑146 (MQ=255)                                   aaGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGc                                                                                                                   <  5:270208/149‑1 (MQ=255)                                   aaGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGc                                                                                                                   <  3:260851/149‑1 (MQ=255)                                    aGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGc                                                                                                                   >  4:280223/1‑148 (MQ=255)                                       ccTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgc                                                                                                               <  4:302477/149‑1 (MQ=255)                                       ccTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgc                                                                                                               >  3:50229/1‑149 (MQ=255)                                        cttgcttgCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgcg                                                                                                              >  6:240049/1‑149 (MQ=255)                                            cttgcCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgcgcgcg                                                                                                          >  2:219653/1‑149 (MQ=255)                                            cttgcCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgcgcgc                                                                                                           <  5:336381/148‑1 (MQ=255)                                                ccAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCAt                                                                                                       <  2:316092/148‑1 (MQ=255)                                                   ggCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATcccc                                                                                                   >  6:265752/1‑149 (MQ=255)                                                        aaCCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCgg                                                                                               >  7:311800/1‑148 (MQ=255)                                                        aaCCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCg                                                                                                <  1:219653/147‑1 (MQ=255)                                                           cccTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAg                                                                                                                     <  7:294308/123‑1 (MQ=255)                                                           cccTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAg                                                                                                                     >  8:294308/1‑123 (MQ=255)                                                           cccTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACg                                                                                           >  7:60535/1‑149 (MQ=255)                                                            ccTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACg                                                                                           >  8:119538/1‑148 (MQ=255)                                                            ccTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGc                                                                                          <  3:280223/149‑1 (MQ=255)                                                             cTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCa                                                                                         <  2:271232/149‑1 (MQ=255)                                                                gtCGGTGAAGGCCGC‑‑CTTGACGAGGGGGGTCAACAGCGCCGCCATTGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCAccc                                                                                      <  8:203435/148‑1 (MQ=255)                                                                cTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCAccc                                                                                      <  3:5302/149‑1 (MQ=255)                                                                  cGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCg                                                                                     >  3:254424/1‑148 (MQ=255)                                                                      gAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATATCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACt                                                                                >  6:322704/1‑149 (MQ=255)                                                                       aaGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTc                                                                               >  2:213686/1‑149 (MQ=255)                                                                         ggCCGC‑‑CTTGCCGAGGGGGGCCAACCGCGCCGCCAATGTGGCAGCCTTCGCCCGTTGTCCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCa                                                                             <  8:184808/149‑1 (MQ=255)                                                                          gccgc‑‑cTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCaa                                                                                  >  1:260149/1‑143 (MQ=255)                                                                          gccgc‑‑cTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCaa                                                                                  <  2:260149/143‑1 (MQ=255)                                                                          gccgc‑‑cTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAg                                                                            >  3:52337/1‑149 (MQ=255)                                                                                    gACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTTTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGAc                                                                      <  8:41020/147‑1 (MQ=255)                                                                                    gACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGAc                                                                      <  8:60535/147‑1 (MQ=255)                                                                                           ggggTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCAt                                                             <  1:121160/149‑1 (MQ=255)                                                                                            gggTCACCAGCGCCGCCAATGTCGCAGCCTTCGCCCTTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATg                                                            <  4:78704/149‑1 (MQ=255)                                                                                             ggTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATgg                                                           <  7:119538/149‑1 (MQ=255)                                                                                             ggTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATgg                                                           >  4:50182/1‑149 (MQ=255)                                                                                                 aaCAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCgg                                                       <  4:50229/149‑1 (MQ=255)                                                                                                  ccgacgccgccgtcgagcctgcacaacgggcgaaggctgcgacattggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCggg                                                      >  5:164223‑M2/54‑149 (MQ=255)                                                                                                  ccgacgccgccgtcgagcctgcacaacgggcgaaggctgcgacattggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCggg                                                      >  6:241315‑M2/54‑149 (MQ=255)                                                                                                   cgacgccgccgtcgagcctgcacaacgggcgaaggctgcgacattggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGCCCCGACGCATGGCCGGGt                                                     >  7:236911‑M2/53‑149 (MQ=255)                                                                                                     acgccgccgtcgagcctgcacaacgggcgaaggctgcgacattggcggcgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGc                                                   <  5:241315‑M2/99‑1 (MQ=255)                                                                                                         CGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCATTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGt                                               >  5:240049‑M1/1‑149 (MQ=255)                                                                                                         CGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGt                                               >  4:254424‑M1/1‑149 (MQ=255)                                                                                                          GCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgcgcgcgc                                                                                                         <  3:17897‑M1/90‑1 (MQ=255)                                                                                                          GCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAgcgcgcgc                                                                                                         >  4:17897‑M1/1‑90 (MQ=255)                                                                                                          GCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAg                                                 >  3:122193‑M1/1‑146 (MQ=255)                                                                                                          GCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAg                                                 <  4:122193‑M1/146‑1 (MQ=255)                                                                                                             aaTGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGAt                                           >  6:100613/1‑149 (MQ=255)                                                                                                                        cTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGgcgc                                >  7:304007/1‑149 (MQ=255)                                                                                                                         ttCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGcc                               >  4:38609/1‑149 (MQ=255)                                                                                                                             cccGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTgg                           >  1:3843/1‑149 (MQ=255)                                                                                                                                   gtgCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGccc                     >  3:290101/1‑149 (MQ=255)                                                                                                                                      cAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGccccc                   <  4:52337/148‑1 (MQ=255)                                                                                                                                         gCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTg               <  5:322704/149‑1 (MQ=255)                                                                                                                                              aCGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTgg              <  4:290346/145‑1 (MQ=255)                                                                                                                                              aCGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTgg              >  3:290346/1‑145 (MQ=255)                                                                                                                                                     cgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCggg   <  2:3843‑M2/147‑1 (MQ=255)                                                                                                                                                     cgTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCggg   <  8:311800‑M2/147‑1 (MQ=255)                                                                                                                                                      gTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCgggg  >  1:139315‑M2/2‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                    CTCCTGGGTGTAGCCATAGCCACCCAACACCTGCAAGGCCTTGCTTGCCAGGCTGAACCCCTGCTCGGTGAAGGCCGC‑‑CTTGACGATGGGGGTCAACAGCGCCGCCAATGTCGCAGCCTTCGCCCGTTGTGCAGGCTCGACGGCGGCGTCGGCGATATCCAGCCACTGGGCCGTCCAGTAGGCCAGCGCGCGCATCCCCTCGGTACGCACCCGCAACTCCAGCAAGACCCGACGCATGGCCGGGTGCAGGTGGATCGGGTCGGCGCCCTGGGCGCCCCCCTTGGCCCGCCCCGGGG  >  NC_002947/3792055‑3792350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.