| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3930902 | 43 (0.800) | 5 (0.100) | 5/250 | NT | 11.1% | coding (206/1293 nt) | PP_5603 | FAD dependent oxidoreductase |
| ? | NC_002947 | = 3930930 | 39 (0.770) | coding (178/1293 nt) | PP_5603 | FAD dependent oxidoreductase | |||||
ACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3930761‑3930902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGAGTGTGG < NC_002947/3930930‑3930786 ACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGG < 5:177648/141‑1ACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGG > 6:177648/1‑141 CTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGGGCCTTGAGCCAG > 4:239293/1‑149 CACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAACCGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCA < 8:176663/149‑1 CACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGGCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTA < 3:239293/149‑1 CTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGT > 3:98840/1‑128 CTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGT < 4:98840/128‑1 ttCTGGCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGA < 5:274096/147‑1 GCGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGAGTGTG < 4:173816/149‑1 CGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGAGTGTGG < 1:322633/149‑1 CGGGGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGAGTGTGG < 4:256972/149‑1 ACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCGAGCAAAAACTCCTGGTTCATCTGCAGATGCTGGCCGTTCCAGCGTACCTGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3930761‑3930902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggGCCTTGAGCCAGGCGGCCATGCCGGCCACCCGCCAGGTACGCTGGAACGGCCAGCATCTGCAGATGAACCAGGAGTTTTTGCTCGACCGGCAACGTTTTGACCAAGCGCTGCGCGAAGACCTTCAGCGCGCAGGCGTGAGTGTGG < NC_002947/3930930‑3930786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |