New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4116891	45 (0.840)	4 (0.080)	4/252	NT	7.8%	coding (36/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha
	?	NC_002947	= 4116933	51 (0.990)					coding (78/456 nt)	iorA‑II	isoquinoline 1‑oxidoreductase subunit alpha

CCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4116741‑4116891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGG  <  NC_002947/4116933‑4116788                                                                                                                                                                                                                                                                                                           CCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGG                                                                                                                                                      >  3:127576/1‑149                 GCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACC                                                                                                                                       >  2:245464/1‑148                                                       ACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAG                                                                                                <  1:245464/149‑1                                                                                                              GAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGAT                                                                                                  <  1:112673/92‑1                                                                                                              GAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGAT                                                                                                  >  2:112673/1‑92                                                                                                                                                     GTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGG  >  8:178275/1‑149                                                                                                                                                                                                                                                                                                           CCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4116741‑4116891 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGG  <  NC_002947/4116933‑4116788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.