New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4116891 | 45 (0.840) | 4 (0.080) | 4/252 | NT | 7.8% | coding (36/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha |
? | NC_002947 | = 4116933 | 51 (0.990) | coding (78/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha |
ACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCGGTG > NC_002947/4116748‑4117038 | cccagaccagCGGTCATCCTCCTTTGCTAGCGCTTCTGCACCGGGGGAAAACGTATTCCACTTGCATATAAAACTGAGCGACAAGAAAGGTGACGGGCAGGTTAAATCTTGGTACTACGCATCAACTAGAAGAGCTATCAGGT‑CGAgga < 4:193814/148‑2 (MQ=255) accagaccagCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGc > 2:60343/1‑149 (MQ=255) gCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGTAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATGAGGT‑CGAGGCGGACGCCGa < 2:243998/149‑1 (MQ=255) gCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Catcgcggattacc > 2:245464‑M1/1‑135 (MQ=255) ggTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Cg < 5:59874/134‑1 (MQ=255) ggTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Cg > 6:59874/1‑134 (MQ=255) aTCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCTTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGc < 4:112676/148‑1 (MQ=255) aTCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGcc > 1:178687/1‑149 (MQ=255) ctGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCctg < 4:64846/147‑1 (MQ=255) cTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTgg < 7:197062/148‑1 (MQ=255) tAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTggg > 3:201358/1‑148 (MQ=255) tttCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATcc < 2:259563/149‑1 (MQ=255) cTGCACCTGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCcgc < 8:110097/148‑1 (MQ=255) cTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCcgc < 6:263591/148‑1 (MQ=255) cACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGAt > 7:178275/1‑148 (MQ=255) ccGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATgac > 8:178275‑M2/1‑146 (MQ=255) ggACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTggg < 2:217289/149‑1 (MQ=255) aCAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Catcgcggattacccacagcaggggcgtgtcggcgtccgcctcgacctgatag < 1:245464‑M1/149‑53 (MQ=255) aTTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCgg > 7:103827/1‑149 (MQ=255) aGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATg < 1:60343/149‑1 (MQ=255) gATAAAACACATCTACTACAACCGTGACGGGCAGTTGAAACCATGGAACTACGCATCAACCAGAAGTCCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGACTGACCGGCACCAAGTATgg < 3:198971/149‑1 (MQ=255) aaaCACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGc < 4:127576/149‑1 (MQ=255) aaCACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCg < 8:103827/149‑1 (MQ=255) aaCACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCg > 7:60217/1‑149 (MQ=255) acacAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGTGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCgg > 2:161399/1‑149 (MQ=255) acaGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCt > 6:54383/1‑149 (MQ=255) acaacaACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGCAGACCTAGCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGAGGCCCGGGGGCTGACCGGCCCCAAGGAAGGCTGCGGCTTGGccc > 3:240432/1‑149 (MQ=255) aacaacCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTCCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAg > 1:15593/1‑149 (MQ=255) caacCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTAGGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGt > 1:97814/1‑149 (MQ=255) caacCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTg < 1:161399/149‑1 (MQ=255) aacCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTgc > 5:183649/1‑149 (MQ=255) tGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGgcgc < 5:54383/149‑1 (MQ=255) gCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTc > 5:239079/1‑149 (MQ=255) cAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCg < 8:60217/149‑1 (MQ=255) cAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCg > 4:24824/1‑149 (MQ=255) cAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCg < 2:178687/149‑1 (MQ=255) gTGAAACCATGGAACTACGCATCAACCAGACGACCTATCAGGT‑AGAGGCGGCCGCCGACAAGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTg < 4:240432/149‑1 (MQ=255) gTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGGGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTg > 7:294320/1‑149 (MQ=255) gTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCtt < 2:142103/124‑1 (MQ=255) gTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTg > 5:296819/1‑149 (MQ=255) tGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGc < 3:24824/149‑1 (MQ=255) gAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Catcgcggattacccacagcaggggcgtgtcggcgtccgcctcgacctgat < 1:112673‑M1/92‑51 (MQ=255) gAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑Catcgcggattacccacagcaggggcgtgtcggcgtccgcctcgacctgat > 2:112673‑M1/1‑42 (MQ=255) aCCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCtggt < 4:201358/149‑1 (MQ=255) ccATGCAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCtggtg > 6:104861/1‑149 (MQ=255) cATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCtggtg > 1:332627/1‑148 (MQ=255) aTGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGAGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGa > 5:388/1‑149 (MQ=255) gCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGAGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAAtgtg < 8:185856/149‑1 (MQ=255) aCCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTgcgc > 2:27008/1‑149 (MQ=255) gaagaCCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAAtgt > 2:288926/1‑138 (MQ=255) gaagaCCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAAtgt < 1:288926/138‑1 (MQ=255) gaagaCCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCt > 4:247889/1‑149 (MQ=255) aCCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGt > 2:314190/1‑149 (MQ=255) cTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATgacctgataggtcttctggttgatgcgtagttccatggtttcacctgcccgtcacggttgttgtcgctgtgttttatctgcatggggaatacgttgt < 1:245464‑M2/149‑98 (MQ=255) cTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTa > 5:300473/1‑149 (MQ=255) aTCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATgacctgataggtcttctggttgatgcgtagttccatggtttc > 2:112673‑M2/1‑50 (MQ=255) aTCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATgacctgataggtcttctggttgatgcgtagttccatggtttc < 1:112673‑M2/92‑43 (MQ=255) aGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCg > 3:324810/1‑149 (MQ=255) aGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCg < 6:239079/149‑1 (MQ=255) gT‑Catcgcggattacccacagcaggggcgtgtcggcgtccgcctcgacctgataggtcttctggttgatgcgtagttccatggtttcacctgcccgtcacggttgttgtcgctgtgttttatctgcatggggaatacgttgtcccccgg > 8:178275‑M1/1‑3 (MQ=255) gT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCGGt > 4:308201/1‑149 (MQ=255) t‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCGGTg < 1:314190/149‑1 (MQ=255) | ACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT‑CGAGGCGGACGCCGACACGCCCCTGCTGTGGGTAATCCGCGATGACCTGGGGCTGACCGGCACCAAGTATGGCTGCGGCTTGGCCCAGTGCGGCGCCTGTTCGGTGCTGGTGGACGGCAATGTGGTGCGCGCCTGCGTTACCCCGGTG > NC_002947/4116748‑4117038 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |