New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4681254 | 43 (0.800) | 4 (0.080) | 4/252 | NT | 8.4% | coding (424/780 nt) | gloB | hydroxyacylglutathione hydrolase |
? | NC_002947 | = 4681285 | 46 (0.900) | coding (455/780 nt) | gloB | hydroxyacylglutathione hydrolase |
GACGAAGGCGATAGGGTGGACGTGCTGGGTGTGACGTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4681104‑4681254 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcTGCATCTGTTCGGGTGTACCTTCGAACATGCGCCC < NC_002947/4681285‑4681251 GACGAAGGCGATAGGGTGGACGTGCTGGGTGTGACGTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCG < 6:331259/148‑1 GTGGACGTGCTGGGTGTGACGTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGCTGCATCTGTTCGG > 6:4514/1‑149 ACGTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGCTGCATCTGTTCGGGTGTACCTTCGAACATGC < 1:127595/149‑1 GTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGCTGCATCTGTTCGGGTGTACCTTCGAACATGCGC < 5:4514/149‑1 CCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGCTGCATCTGTTCGGGTGTACCTTCGAACATGCGCCC < 4:9655/148‑1 GACGAAGGCGATAGGGTGGACGTGCTGGGTGTGACGTTCCAGGTAATGGCGGTACCCGGCCACACCCTGGGGCATATCGCCTTCTTCAGCGACCAGCCAGCAACGCCCATCCTGTTCAGTGGCGACACCCTGTTCGCCGCCGGTTGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4681104‑4681254 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcTGCATCTGTTCGGGTGTACCTTCGAACATGCGCCC < NC_002947/4681285‑4681251 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |