New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 499227254 (1.000)3 (0.060) 3/252 NT 5.9% coding (229/1233 nt) bkdAA branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha
?NC_002947 = 4992305 44 (0.860)coding (262/1233 nt) bkdAA branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha

CCGCGATCGATGTCGATGCTGCCGACACTGCCGACCTGTCCTACAGCCTGGTCCGCGTGCTCGACGAGCAAGGCGATGCGCAAGGCCCCTGGGCCGAAGACATCGACCCGCAGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4992156‑4992272
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agatccGCGTCTTGAGCATGGCGCGCATGCCTTGACGGAGGATCTGCGGGTCGATGTCTTCGGCCCAGGGGCCTTGCGCATCGCCTTGCTCGTCGAGCACGCGGACCAGGCTGTAGGACAGGTCGGCAGTGTCGGCAGCATCGACATCGAT  <  NC_002947/4992305‑4992161
                                                                                                                                                                                                                                                                      
CCGCGATCGATGTCGATGCTGCCGACACTGCCGACCTGTCCTACAGCCTGGTCCGCGTGCTCGACGAGCAAGGCGATGCGCAAGGCCCCTGGGCCGAAGACATCGACCCGCAGATCCGCGTCTTGAGCATGGCGCGCATGCCTTGACG                                                                                                                    >  6:10145/1‑148
            tctATGCTGCCGACACTGCCGACCTGTCCTCCAGCCTGGTCCGCGTGCTCGACGAGCAAGGCGATGCGCAAGGCCCCTGGGTTGAAGACATCGACCCGCAGATCCGCGTCTTGAGCATGGCGCGCATGCCTTGACGGAGGATCTGCG                                                                                                         <  1:271146/144‑1
            TCGATGCTGCCGACACTGCCGACCTGTCCTACAGCCTGGTCCGCGTGCTCGACGAGCAAGGCGATGCGCAAGGCCCCTGGGCCGAAGACATCGACCCGCAGATCCGCGTCTTGAGCATGGCGCGCATGCCTTGACGGAGGATCTGCGG                                                                                                        <  5:10145/148‑1
                                                                                                                  TCCGCGTCTTGAGCATGGGGCGCATGCCTTGACGGAGGATCTGCTGGTCGATGTCTTCGGCCCAGGGGCCTTGCGCATCGCCTTGCTCGTCGAGCAAGCGGACCAGGCTGTAGTGAAGGTCGGCAGTGTCGGCAGCATCGACATCGAT  <  4:320013/148‑1
                                                                                                                                                                                                                                                                      
CCGCGATCGATGTCGATGCTGCCGACACTGCCGACCTGTCCTACAGCCTGGTCCGCGTGCTCGACGAGCAAGGCGATGCGCAAGGCCCCTGGGCCGAAGACATCGACCCGCAGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4992156‑4992272
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agatccGCGTCTTGAGCATGGCGCGCATGCCTTGACGGAGGATCTGCGGGTCGATGTCTTCGGCCCAGGGGCCTTGCGCATCGCCTTGCTCGTCGAGCACGCGGACCAGGCTGTAGGACAGGTCGGCAGTGTCGGCAGCATCGACATCGAT  <  NC_002947/4992305‑4992161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.