| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5000218 | 42 (0.780) | 3 (0.060) | 3/250 | NT | 7.2% | coding (1071/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
| ? | NC_002947 | = 5000241 | 37 (0.730) | coding (1094/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter | |||||
GCTGTTCTCGCTGAGCCAGCGCGGTCACGCACCCAAGCTGTTCTCACGCACCAGTGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5000065‑5000218‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaccAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGTACGCCCTTGGCACTGGTGCGTGAGAACAGCTTGGGTG < NC_002947/5000241‑5000094 GCTGTTCTCGCTGAGCCAGCGCGGTCACGCACCCAAGCTGTTCTCACGCACCAGTGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCAACCTGTTCA > 8:190943/1‑149 TTCTCGCTGAGCCAGCGCGGTCACGCACCCAAGCTGTTCTCACGCACCAGTGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGAC > 5:277423/1‑149 TTCTCGCTGAGCCAGCGCGGTCACGCACCCAACCTGTTATCACGCACCATTGCCAATGCAGGTACCGATCAACTCCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATG < 1:276376/149‑1 TTCTCACGCACCAGTGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAG < 3:8891/149‑1 TGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCAGGCTGCCGGTACTCTTGGCCAAGGTCATGAAC < 3:159246/133‑1 TGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCAGGCTGCCGGTACTCTTGGCCAAGGTCATGAAC > 4:159246/1‑133 TGACCAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCTGATCGACAGGCTCAGCAGCAGTGCATTGATCGGTACGCCCTTGGCACTGGTGCGTGAGAACAGCTTG > 4:162987/1‑149 CAGGCTGCCGGTACTCTTGGCCAAGGTCTTGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGT < 7:215740/112‑1 CAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGTACGCCCTTGGCACTGGTGCGTGAGAACAGCTTGGGTG > 1:11372/1‑149 CAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGTACGCCCTTGGCACTGGTGCGTGAGAACAGCTTGGGTG > 5:251915/1‑149 CAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGT > 8:215740/1‑112 GCTGTTCTCGCTGAGCCAGCGCGGTCACGCACCCAAGCTGTTCTCACGCACCAGTGCCAA‑GGGCGTACCGATCAA‑TGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5000065‑5000218‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaccAGGCTGCCGGTACTCTTGGCCAAGGTCATGAACAGGTCGCCGCCACTGACAAAGTGCACGGTCAGGATCATCGTGCAGATCGACAGGCTCAGCAGCAGTGCATTGATCGGTACGCCCTTGGCACTGGTGCGTGAGAACAGCTTGGGTG < NC_002947/5000241‑5000094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |