New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5000218 | 42 (0.780) | 3 (0.060) | 3/250 | NT | 7.2% | coding (1071/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
? | NC_002947 | = 5000241 | 37 (0.730) | coding (1094/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
CACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAT > NC_002947/5000094‑5000388 | cACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg > 1:11372‑M2/1‑148 (MQ=255) cACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg > 5:251915‑M2/1‑148 (MQ=255) cAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCAGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtca > 4:162987‑M2/1‑144 (MQ=255) cTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGt < 4:207217/149‑1 (MQ=255) ttCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCg > 1:32235/1‑148 (MQ=255) cGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGAt < 4:56115/149‑1 (MQ=255) gCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATc > 8:204423/1‑149 (MQ=255) aaGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTcatcatcat > 7:95251/1‑149 (MQ=255) aaGGGCGTACCGATCAACGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTcatcatcat > 1:99855/1‑149 (MQ=255) aGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCatcatcatc < 7:204423/149‑1 (MQ=255) gggCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCg < 8:223244/149‑1 (MQ=255) tACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCAc < 1:95948/149‑1 (MQ=255) aCCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg > 8:215740‑M2/1‑111 (MQ=255) aCCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCAAGACCTTGGCCAAGAGTACCGGCAGCCTg < 7:215740‑M2/112‑2 (MQ=255) cGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCACCATCATCGCCCACGTg < 1:139974/149‑1 (MQ=255) tGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATgc > 2:137989/1‑149 (MQ=255) tGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATg < 5:225121/148‑1 (MQ=255) tGCACTGCTGCTGAGACTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATg > 6:225121/1‑148 (MQ=255) aCTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATgcgc > 5:138613/1‑148 (MQ=255) aCTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa < 2:188645/149‑1 (MQ=255) gctgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATc > 8:24176/1‑148 (MQ=255) tgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa > 2:302919/1‑144 (MQ=255) tgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa < 1:302919/144‑1 (MQ=255) tGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCAc > 4:63095/1‑149 (MQ=255) tCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGa < 3:63095/149‑1 (MQ=255) cACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCgg < 2:99855/146‑1 (MQ=255) aCGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGc < 6:138613/149‑1 (MQ=255) gatCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAg > 2:334610/1‑137 (MQ=255) gatCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAg < 1:334610/137‑1 (MQ=255) tCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc < 1:137989/149‑1 (MQ=255) gCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc > 8:19458/1‑139 (MQ=255) gCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc < 7:19458/139‑1 (MQ=255) aCTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGcc > 6:158436/1‑149 (MQ=255) aGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg > 5:132298/1‑144 (MQ=255) aGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg < 6:132298/144‑1 (MQ=255) cTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggcactggtgcgtgagaa < 3:8891‑M2/149‑115 (MQ=255) cTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCaa > 4:85462/1‑149 (MQ=255) gTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggca > 4:159246‑M2/1‑33 (MQ=255) gTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggca < 3:159246‑M2/133‑101 (MQ=255) cATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATc < 6:180664/148‑1 (MQ=255) tGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCAtt < 8:95251/149‑1 (MQ=255) gACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCACGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTg > 1:99797/1‑149 (MQ=255) ccAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTcccc > 2:229194/1‑125 (MQ=255) ccAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTcccc < 1:229194/125‑1 (MQ=255) gagTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg > 8:53246/1‑112 (MQ=255) gCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTgg > 1:32329/1‑147 (MQ=255) gCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCa < 3:241030/149‑1 (MQ=255) ccTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCa > 4:285327/1‑149 (MQ=255) cTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAt < 7:24176/149‑1 (MQ=255) | CACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAT > NC_002947/5000094‑5000388 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |