New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 500021842 (0.780)3 (0.060) 3/250 NT 7.2% coding (1071/1383 nt) PP_4407 gamma‑aminobutyrate transporter
?NC_002947 = 5000241 37 (0.730)coding (1094/1383 nt) PP_4407 gamma‑aminobutyrate transporter

CACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAT  >  NC_002947/5000094‑5000388
                                                                                                                                                   |                                                                                                                                                   
cACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg                                                                                                                                                    >  1:11372‑M2/1‑148 (MQ=255)
cACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg                                                                                                                                                    >  5:251915‑M2/1‑148 (MQ=255)
    cAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCAGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtca                                                                                                                                                >  4:162987‑M2/1‑144 (MQ=255)
        cTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGt                                                                                                                                            <  4:207217/149‑1 (MQ=255)
           ttCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCg                                                                                                                                          >  1:32235/1‑148 (MQ=255)
                 cGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGAt                                                                                                                                   <  4:56115/149‑1 (MQ=255)
                  gCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATc                                                                                                                                  >  8:204423/1‑149 (MQ=255)
                             aaGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTcatcatcat                                                                                                                       >  7:95251/1‑149 (MQ=255)
                             aaGGGCGTACCGATCAACGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTcatcatcat                                                                                                                       >  1:99855/1‑149 (MQ=255)
                              aGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCatcatcatc                                                                                                                      <  7:204423/149‑1 (MQ=255)
                               gggCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCg                                                                                                                     <  8:223244/149‑1 (MQ=255)
                                    tACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCAc                                                                                                                <  1:95948/149‑1 (MQ=255)
                                     aCCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTg                                                                                                                                                    >  8:215740‑M2/1‑111 (MQ=255)
                                     aCCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCAAGACCTTGGCCAAGAGTACCGGCAGCCTg                                                                                                                                                    <  7:215740‑M2/112‑2 (MQ=255)
                                       cGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCACCATCATCGCCCACGTg                                                                                                             <  1:139974/149‑1 (MQ=255)
                                              tGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATgc                                                                                                      >  2:137989/1‑149 (MQ=255)
                                              tGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATg                                                                                                       <  5:225121/148‑1 (MQ=255)
                                              tGCACTGCTGCTGAGACTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATg                                                                                                       >  6:225121/1‑148 (MQ=255)
                                                 aCTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATgcgc                                                                                                    >  5:138613/1‑148 (MQ=255)
                                                 aCTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa                                                                                                   <  2:188645/149‑1 (MQ=255)
                                                    gctgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATc                                                                                                 >  8:24176/1‑148 (MQ=255)
                                                      tgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa                                                                                                   >  2:302919/1‑144 (MQ=255)
                                                      tgctgAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCa                                                                                                   <  1:302919/144‑1 (MQ=255)
                                                               tGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCAc                                                                                     >  4:63095/1‑149 (MQ=255)
                                                                 tCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGa                                                                                   <  3:63095/149‑1 (MQ=255)
                                                                         cACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCgg                                                                              <  2:99855/146‑1 (MQ=255)
                                                                          aCGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGc                                                                          <  6:138613/149‑1 (MQ=255)
                                                                               gatCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAg                                                                                 >  2:334610/1‑137 (MQ=255)
                                                                               gatCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAg                                                                                 <  1:334610/137‑1 (MQ=255)
                                                                                 tCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc                                                                   <  1:137989/149‑1 (MQ=255)
                                                                                           gCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc                                                                   >  8:19458/1‑139 (MQ=255)
                                                                                           gCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAAc                                                                   <  7:19458/139‑1 (MQ=255)
                                                                                             aCTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGcc                                                       >  6:158436/1‑149 (MQ=255)
                                                                                                     aGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg                                                    >  5:132298/1‑144 (MQ=255)
                                                                                                     aGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg                                                    <  6:132298/144‑1 (MQ=255)
                                                                                                                 cTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggcactggtgcgtgagaa                                   <  3:8891‑M2/149‑115 (MQ=255)
                                                                                                                 cTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCaa                                   >  4:85462/1‑149 (MQ=255)
                                                                                                                   gTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggca                                                 >  4:159246‑M2/1‑33 (MQ=255)
                                                                                                                   gTTCATGACCTTGGCCAAGAGTACCGGCAGCCTggtcatgaacaggtcgccgccactgacaaagtgcacggtcaggatcatcgtgcagatcgacaggctcagcagcagtgcattgatcggtacgcccttggca                                                 <  3:159246‑M2/133‑101 (MQ=255)
                                                                                                                      cATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATc                               <  6:180664/148‑1 (MQ=255)
                                                                                                                        tGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCAtt                            <  8:95251/149‑1 (MQ=255)
                                                                                                                         gACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCACGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTg                           >  1:99797/1‑149 (MQ=255)
                                                                                                                                 ccAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTcccc                                           >  2:229194/1‑125 (MQ=255)
                                                                                                                                 ccAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTcccc                                           <  1:229194/125‑1 (MQ=255)
                                                                                                                                     gagTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTgg                                                    >  8:53246/1‑112 (MQ=255)
                                                                                                                                             gCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTgg         >  1:32329/1‑147 (MQ=255)
                                                                                                                                             gCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCa       <  3:241030/149‑1 (MQ=255)
                                                                                                                                                 ccTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCa   >  4:285327/1‑149 (MQ=255)
                                                                                                                                                  cTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAt  <  7:24176/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CACCCAAGCTGTTCTCACGCACCAGTGCCAAGGGCGTACCGATCAATGCACTGCTGCTGAGCCTGTCGATCTGCACGATGATCCTGACCGTGCACTTTGTCAGTGGCGGCGACCTGTTCATGACCTTGGCCAAGAGTACCGGCAGCCTGGTCATGGTCGTATGGATCTTCATCATCATCGCCCACGTGGCCATGCGCATCAAAACCCGCCACGAAGCGGTCGCCCCAAACGCCTTCCGTGCCTGGCTGTTCCCCTACACCAATATCATTGCGCTGTTCGCCTTGCTGGCAGTCAT  >  NC_002947/5000094‑5000388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.