| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5037600 | NA (NA) | 3 (0.060) | 3/248 | NT | NA | coding (692/1536 nt) | PP_4443 | transposase |
| ? | NC_002947 | = 5037670 | NA (NA) | coding (762/1536 nt) | PP_4443 | transposase | |||||
GATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5037446‑5037600‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcgtTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAAGGATTTTCTCCTGC < NC_002947/5037670‑5037523 GATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAAC > 2:148713/1‑149GATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAAC > 4:159840/1‑149 ATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACC > 5:278316/1‑149 ATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAAC < 3:266270/148‑1 ATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAAC > 4:266270/1‑148 TAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCG > 8:25113/1‑149 TAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCACCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACC < 7:5625/148‑1 AAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGG > 4:183288/1‑149 AAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGC < 8:192662/149‑1 GGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGT > 8:316809/1‑149 TTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCG < 4:297207/124‑1 GCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTC > 7:173043/1‑149 AATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTT < 6:157733/149‑1 GCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACC < 8:173043/149‑1 CCGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAAGGATTTTC > 2:148531/1‑149 CGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAAGGATTTTCT > 2:116585/1‑149 CGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAA < 4:214986/140‑1 CGGCGTTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAA > 3:214986/1‑140 TTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAAGGATTTTCTCCTGC < 7:9268/149‑1 TTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCAAGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACACACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAACGATTTTCTCCTGC > 8:22752/1‑149 GATAAAGGTATCCCGACCGCAGGCTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTACCGCTGTACCGGCAGGAGAAAATCCTTGGCCGCGCCGGGCTGGCAATTGCTCGCTCGACCTTGGCCCAGTGGGTCGGACAAACCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5037446‑5037600‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcgtTTCGTCAGCGTGAATCACGCCCTGCTTCAGCACAGCTTCACGCAGAGCATCGACCAGCGGCTGGAGTCGCACGCCGGTTTGTCCGACCCACTGGGCCAAGGTCGAGCGAGCAATTGCCAGCCCGGCGCGGCCAAGGATTTTCTCCTGC < NC_002947/5037670‑5037523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |