New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5037600NA (NA)3 (0.060) 3/248 NT NA coding (692/1536 nt) PP_4443 transposase
?NC_002947 = 5037670 NA (NA)coding (762/1536 nt) PP_4443 transposase

CTCCAGCCGCTGGTCGATGCTCTGCGTGAAGCTGTGCTGAAGCAGGGCGTGATTCACGCTGACGAAACGCCGGTGCAGATGCTTGCGCCAGGCGAGAAGAAAACTCACCGGGCTTATGTTTGGGCCTATAGCACGACGCCGTTTTCGGC  >  NC_002947/5037605‑5037753
                                                                 |                                                                                   
ggcctgCCGCTGGGCGATGGTCTGCGTGAAGCTGGGCTGAAGCAGGGCGTGATTCACGCTGACGATTCGGCTGTGCAGATGCTTGCGCCAGGCGAGAAGAAAACTCACCGTGCTTATGTTTGGGCCTATAGCACGACGCCGTTTTCGgc  <  8:219799/144‑1 (MQ=1)
                                                                 |                                                                                   
CTCCAGCCGCTGGTCGATGCTCTGCGTGAAGCTGTGCTGAAGCAGGGCGTGATTCACGCTGACGAAACGCCGGTGCAGATGCTTGCGCCAGGCGAGAAGAAAACTCACCGGGCTTATGTTTGGGCCTATAGCACGACGCCGTTTTCGGC  >  NC_002947/5037605‑5037753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.