| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5064017 = | 48 (0.890) | 3 (0.060) | 3/248 | NT | 6.0% | coding (980/1293 nt) | PP_4461 | MFS transporter |
| ? | NC_002947 | 5064051 = | 49 (0.970) | coding (946/1293 nt) | PP_4461 | MFS transporter | |||||
GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5064171‑5064017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggtTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC > NC_002947/5064051‑5064192 GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCA < 5:166724/149‑1GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCA < 5:171468/149‑1GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCC > 4:2752/1‑148GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCC < 8:208337/148‑1GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCGCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCAGGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCA < 6:53410/149‑1 CGCTGCTTCTTCAGATCACTCTGATTCGAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCTGTGCAAGCTTCCAT < 7:221168/149‑1 CCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAA > 5:79908/1‑135 CCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAA < 6:79908/135‑1 CTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTG > 3:41973/1‑147 ATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAAGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC > 2:179351/1‑149 GCGCTGCTGCTTCAGATCACGCTGATTCCAGTTGCCGGTGCTCTGTCCGACCGATTTGGGCGTAAGCCGCTGCTTCTCCTTGCATGTCTTGGCACAGCTACCCTTGCGTACCCAATCCTGAACCTGATGTCTGGCGGTGCAAGCTTCCATCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5064171‑5064017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggtTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCAGCGGCTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCAGCAGCGCGATATTACTGGAAATCAACGC > NC_002947/5064051‑5064192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |