| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5064017 = | 48 (0.890) | 3 (0.060) | 3/248 | NT | 6.0% | coding (980/1293 nt) | PP_4461 | MFS transporter |
| ? | NC_002947 | 5064051 = | 49 (0.970) | coding (946/1293 nt) | PP_4461 | MFS transporter | |||||
GCCGAAGCAACATACTGCCAATGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCA > NC_002947/5063875‑5064164 | gcgttgatttccagtaatatcgcgctgctgcttcagatcacgctgattccagttgccggtgctctgtccgaccgatttgggcgtaagccgctgcttctctttgcatgtcttggcacagctacccttgcgtacccaatcctgaACCTGAt > 2:179351‑M1/143‑149 (MQ=255) aaCATACTGCCAATGTGTACACCACCGTCATCCAAGTGTTACGTAACCGCGTTTGGAAAATTTCTCATATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCTGCACTTCAGCATAACGACCTGATGGAAGCtt < 5:158561/149‑1 (MQ=255) aCATACTGCCAATGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTg < 2:24978/149‑1 (MQ=255) ccAATGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGc > 2:137990/1‑147 (MQ=255) aaTGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGa < 7:134080/149‑1 (MQ=255) aaTGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGa < 5:46746/149‑1 (MQ=255) aTGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGa > 2:123027/1‑148 (MQ=255) tgtACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATc < 7:191040/149‑1 (MQ=255) ccACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTc < 3:88185/149‑1 (MQ=255) cACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGtt > 8:96178/1‑147 (MQ=255) cACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCa < 2:174661/149‑1 (MQ=255) cagatcacgctgattccagttgccggtgctctgtccgaccgatttgggcgtaagccgctgcttctccttgcatgtcttggcacagctacccttgcgtacccaatcctgaACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAg > 3:41973‑M1/110‑147 (MQ=255) tCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGAtt < 1:294691/149‑1 (MQ=255) aTCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTgg < 4:211059/149‑1 (MQ=255) aaGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTAc > 8:168386/1‑149 (MQ=255) ttccagttgccggtgctctgtccgaccgatttgggcgtaagccgctgcttctccttgcatgtcttggcacagctacccttgcgtacccaatcctgaACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAgg < 6:79908‑M1/39‑1 (MQ=255) ttccagttgccggtgctctgtccgaccgatttgggcgtaagccgctgcttctccttgcatgtcttggcacagctacccttgcgtacccaatcctgaACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAgg > 5:79908‑M1/97‑135 (MQ=255) ttACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAg > 4:72650/1‑149 (MQ=255) aCGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAggg > 5:159034/1‑149 (MQ=255) aCGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAgg < 6:175420/148‑1 (MQ=255) gggAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGcc > 4:76016/1‑146 (MQ=255) ggAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCa < 2:15681/111‑1 (MQ=255) ggAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCa > 1:15681/1‑111 (MQ=255) gAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGa > 2:111362/1‑148 (MQ=255) tttCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGc > 2:317052/1‑148 (MQ=255) aGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGgag > 3:98767/1‑148 (MQ=255) aTAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAag > 5:267298/1‑149 (MQ=255) aGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAag > 1:315732/1‑147 (MQ=255) gCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCgg > 2:198620/1‑149 (MQ=255) gCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGc > 2:253297/1‑120 (MQ=255) gCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGc < 1:253297/120‑1 (MQ=255) gCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑tt < 3:76016/148‑1 (MQ=255) gCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑tt < 6:156776/148‑1 (MQ=255) cAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGc > 5:6150/1‑149 (MQ=255) aGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGcc < 1:123027/149‑1 (MQ=255) ggCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAg > 8:3501/1‑108 (MQ=255) gCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCa > 7:129594/1‑148 (MQ=255) cGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAAtc < 1:111362/149‑1 (MQ=255) gAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAAtcg < 3:72650/149‑1 (MQ=255) aTTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGa < 1:317052/149‑1 (MQ=255) aaaTAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACagag > 8:103832/1‑149 (MQ=255) aaaTAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACagag > 1:257122/1‑149 (MQ=255) tAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCAc < 8:129594/149‑1 (MQ=255) tAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCAc < 7:96178/149‑1 (MQ=255) gTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCg < 6:267298/149‑1 (MQ=255) cgcTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGc > 3:2752/1‑148 (MQ=255) gcTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCaa > 2:238316/1‑149 (MQ=255) cTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAAc < 6:159034/149‑1 (MQ=255) cTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAAc > 4:215548/1‑149 (MQ=255) caCTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAg < 1:198620/149‑1 (MQ=255) aCTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGc < 8:234057/149‑1 (MQ=255) cagcaTAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGa < 4:98767/149‑1 (MQ=255) tAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTg > 3:279936/1‑148 (MQ=255) aaCGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGTGGGGGGTGGGAACGGGGCGTTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCt > 1:110781/1‑149 (MQ=255) aCGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAag < 7:168386/149‑1 (MQ=255) aCGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAag < 1:137990/149‑1 (MQ=255) gACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAagca > 3:299590/1‑149 (MQ=255) | GCCGAAGCAACATACTGCCAATGTGTACCCCACCGTCATCCAAGTGTTACGTAACCGCGTTGGGAAAATTTCGCAGATAGTCGCTGGCCCAGGGCCCGAATACATTGCAAATAGTGCGCTTAAGCAGCACTGCAGCATAACGACCTGATGGAAGCTTGCACCGCCAGACATCAGGTTCAGGATTGGGTACGCAAGGGTAGCTGTGCCAAGACATGCAAGGAGAAGCA‑‑GCGGC‑TTACGCCCAAATCGGTCGGACAGAGCACCGGCAACTGGAATCAGCGTGATCTGAAGCA > NC_002947/5063875‑5064164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |