| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5178987 = | 56 (1.040) | 4 (0.080) | 4/248 | NT | 7.1% | coding (337/426 nt) | PP_4556 | hypothetical protein |
| ? | NC_002947 | 5179039 = | 52 (1.030) | coding (285/426 nt) | PP_4556 | hypothetical protein | |||||
GCATGTGCACCGGCCCCATGGTGTTCGAACTTGCCCAACTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5179139‑5178987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcgtcGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGAA > NC_002947/5179039‑5179185 GCATGTGCACCGGCCCCATGGTGTTCGAACTTGCCCATCTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGT > 4:92111/1‑149GCATGTGCACCGGCCCCATGGTGTTCGAACTTGCCCAACTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGT > 3:236998/1‑149GCATGTGCACCGGCCCCATGGTGTTCGAACTTGCCCAACTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGT < 4:236998/149‑1 GTGCACCGGCCCCATGGTGTTCGAACTTGCCCAACTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGT < 6:255522/148‑1 GGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTG > 3:67137/1‑149 GACGACGAAAGCCAGTGAGTCTTCATGCGCGCCACGGTGGGCTATCGTCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCA > 3:63849/1‑148 GACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATG > 8:98883/1‑149 GAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCC < 7:98883/149‑1 CGTCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCC < 2:250302/148‑1 TCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTT < 2:207319/149‑1 TCGTCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTT < 3:157338/149‑1 TCGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGAA < 3:123713/149‑1 GCATGTGCACCGGCCCCATGGTGTTCGAACTTGCCCAACTCACCGTGCACGCCGCTGGCGATCTGGCCCTGGCCCATTGGCTGAACCGCTGCGGCCCGGGCGACGACGAAAGCCAGTGCGGCTTCATGCGCGCCACGGTGGGCTATCGTCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5179139‑5178987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcgtcGCCCGGGCCGCAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGAA > NC_002947/5179039‑5179185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |