New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5178987 =	56 (1.040)	4 (0.080)	4/248	NT	7.1%	coding (337/426 nt)	PP_4556	hypothetical protein
	?	NC_002947	5179039 =	52 (1.030)					coding (285/426 nt)	PP_4556	hypothetical protein

CGGCTCAGGGCTTGAGATCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGAA  >  NC_002947/5178894‑5179185                                                                                                                                                   |                                                                                                                                                    caccggccccatggtgttcgaacttgcccaactcaccgtgcacgccgctggcgatctggccctggcccattggctgaaccgctgcggcccgggcGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGcc                                                                                                                                                   >  3:67137‑M1/95‑149 (MQ=255)  ggCTCAGGGCTTGAGATCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCg                                                                                                                                                 <  1:85267/149‑1 (MQ=255)       aGGGCTTGAGATCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCg                                                                                                                                            >  2:226853/1‑149 (MQ=255)             tGAGATCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCgg                                                                                                                                     <  5:111638/149‑1 (MQ=255)              gagaTCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCATGTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCgg                                                                                                                                     >  1:250302/1‑149 (MQ=255)                gaTCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCgg                                                                                                                                     <  6:238682/146‑1 (MQ=255)                gaTCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCgg                                                                                                                                     >  5:238682/1‑146 (MQ=255)                    aaaCAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGcc                                                                                                                              <  4:120448/149‑1 (MQ=255)                     aaCAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGcc                                                                                                                              >  6:177779/1‑148 (MQ=255)                         gcgcTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgg                                                                                                                         <  5:190338/149‑1 (MQ=255)                         gcgcTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgg                                                                                                                         <  1:226853/149‑1 (MQ=255)                         gcgcTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgg                                                                                                                         <  4:292337/149‑1 (MQ=255)                           gcTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgggc                                                                                                                       >  7:130350/1‑149 (MQ=255)                            cTTTTTGCGTTTCGATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgggcc                                                                                                                      <  5:21352/149‑1 (MQ=255)                                 tGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgggccagggc                                                                                                                 >  8:1051/1‑149 (MQ=255)                                 tGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgggccagggc                                                                                                                 >  8:15964/1‑149 (MQ=255)                                        ccATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTTCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATc                                                                                                           <  8:130350/148‑1 (MQ=255)                                               gAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAgcgg                                                                                                   >  2:74357/1‑149 (MQ=255)                                               gAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAgcgg                                                                                                   >  7:169002/1‑149 (MQ=255)                                                aaaGGCGCCGACCA‑GTGTTCGTGGGTTACCTGCCACTGGCCGCCTTGACGTCGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCa                                                                                                       <  5:106891/144‑1 (MQ=255)                                                aaaGGCGCCGACCA‑GTGTTCGTGGGTTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCa                                                                                                       >  6:106891/1‑144 (MQ=255)                                                aaaGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAgcggc                                                                                                  >  4:94235/1‑149 (MQ=255)                                                   ggCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTg                                                                                               <  2:102255/149‑1 (MQ=255)                                                     cgcCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCa                                                                                             <  3:94235/149‑1 (MQ=255)                                                      gcCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCTTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCAc                                                                                            <  3:192587/149‑1 (MQ=255)                                                      gcCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAgcgg                                                                                                   >  8:287017/1‑142 (MQ=255)                                                      gcCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAgcgg                                                                                                   <  7:287017/142‑1 (MQ=255)                                                       ccGACCA‑GTGTTCGTGGATTACGTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCTTGAAGCCGCAGTGGCTTTCGTCGTGGCCCGGGCCG‑CAGCGGTTCAGCCAATGggccagggccag                                                                                                              <  1:302851/130‑1 (MQ=255)                                                                  ttCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTggg                                                                                 >  8:92175/1‑149 (MQ=255)                                                                  ttCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTgg                                                                                  <  1:200734/148‑1 (MQ=255)                                                                     gTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGACAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGc                                                                                >  4:157338/1‑147 (MQ=255)                                                                      tGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAg                                                                             >  2:174921/1‑149 (MQ=255)                                                                        gATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATgg                                                                                                                         >  2:240161/1‑103 (MQ=255)                                                                        ctcatccTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGtt                                                                           <  5:289880/144‑1 (MQ=255)                                                                         aTTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTc                                                                          <  7:15964/149‑1 (MQ=255)                                                                          ttACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCg                                                                         <  6:120371/149‑1 (MQ=255)                                                                          ttACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCg                                                                         <  3:204334/149‑1 (MQ=255)                                                                           ttccTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTgg                                                                                  <  8:309308/137‑1 (MQ=255)                                                                           tACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTgg                                                                                  >  7:309308/1‑139 (MQ=255)                                                                             ccTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCTGCGTGCACGGTGAGTTTGGCAAGTTCGaa                                                                       <  5:89008/148‑1 (MQ=255)                                                                                 ccACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAacac                                                                    <  3:230331/147‑1 (MQ=255)                                                                                   aCTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATg                                                                <  1:74357/149‑1 (MQ=255)                                                                                       gccgccTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGATGGGCAAGTTCGAACACCATGGGGc                                                            >  3:92111/1‑149 (MQ=255)                                                                                          gccTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCgg                                                         <  8:169002/149‑1 (MQ=255)                                                                                            ggcgacgacgaaagccagtgcggcttcatgcgcgccacggtgggctatcgtcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTg                                                       >  3:67137‑M2/56‑149 (MQ=255)                                                                                            cTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTg                                                       <  1:174921/149‑1 (MQ=255)                                                                                               gacgacgaaagccagtgagtcttcatgcgcgccacggtgggctatcgtcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGca                                                     >  3:63849‑M2/53‑148 (MQ=255)                                                                                                ACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGcac                                                    <  6:255522‑M1/148‑1 (MQ=255)                                                                                                  gacgaaagccagtgcggcttcatgcgcgccacggtgggctatcgtcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATg                                                 >  8:98883‑M2/50‑149 (MQ=255)                                                                                                   ACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGc                                                >  3:236998‑M1/1‑149 (MQ=255)                                                                                                   ACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGc                                                <  4:236998‑M1/149‑1 (MQ=255)                                                                                                   ACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGATGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGc                                                >  4:92111‑M1/1‑149 (MQ=255)                                                                                                     gaaagccagtgcggcttcatgcgcgccacggtgggctatcgtcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGccc                                              <  7:98883‑M2/103‑1 (MQ=255)                                                                                                       tAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCAt                                            >  1:224974/1‑149 (MQ=255)                                                                                                                gTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATCGGGCCGGTGCACATGCCCATGCACATTTc                                   >  8:270635/1‑149 (MQ=255)                                                                                                                     gcgcATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGt                              <  7:1051/149‑1 (MQ=255)                                                                                                                     gcgcATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGt                              >  4:123713/1‑149 (MQ=255)                                                                                                                     gcgcATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGt                              <  5:177779/149‑1 (MQ=255)                                                                                                                              gCCGCACTGGCTTTCGTCGTCGCCCGGGCCGACAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCCGCGCCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTCCGCCgtg                      >  1:207319/1‑149 (MQ=255)                                                                                                                                cGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAg                   <  5:255522/149‑1 (MQ=255)                                                                                                                                 gCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAgg                  >  4:298040/1‑149 (MQ=255)                                                                                                                                     tGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGa              >  6:318327/1‑149 (MQ=255)                                                                                                                                            cgtcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGcc        <  2:250302‑M2/141‑1 (MQ=255)                                                                                                                                              tcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCttt     <  3:157338‑M2/144‑1 (MQ=255)                                                                                                                                              tcgtcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCttt     <  2:207319‑M2/144‑1 (MQ=255)                                                                                                                                                 tcGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGaa  <  3:123713‑M2/147‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CGGCTCAGGGCTTGAGATCAAACAGCGCTTTTTGCGTTTCCATGTCGAAAGGCGCCGACCA‑GTGTTCGTGGATTACCTGCCACTGGCCGCCTTGACGACGATAGCCCACCGTGGCGCGCATGAAGCCGCACTGGCTTTCGTCGTCGCCCGGGCCG‑CAGCGGTTCAGCCAATGGGCCAGGGCCAGATCGCCAGCGGCGTGCACGGTGAGTTGGGCAAGTTCGAACACCATGGGGCCGGTGCACATGCCCATGCACATTTCCCAGTGCGCCGTGTAGGCCGACTTGCCTTTGAA  >  NC_002947/5178894‑5179185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.