New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5571407 = | 38 (0.710) | 5 (0.100) | 4/236 | NT | 14.7% | intergenic (+29/+112) | queG/yicG | epoxyqueuosine reductase/inner membrane protein |
? | NC_002947 | 5571492 = | 24 (0.500) | intergenic (+114/+27) | queG/yicG | epoxyqueuosine reductase/inner membrane protein |
ACTGGGAAATGCCCAAGTTCCACTACAACGACCAGCAGTGACGCAATTTACAAGCGCAACATGGCCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5571559‑5571407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCGCCTGTTCTGCCGGCACCTTGA > NC_002947/5571492‑5571637 ACTGGGAAATGCCCAAGTTCCACTACAACGACCAGCAGTGACGCAATTTACAAGCGCAACATGGCCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCC > 3:151790/1‑149 GGAAATGCCCAAGTTCCACTACAACGACCAGCAGTGACGCAATTTACAAGCGCAACATGGCCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCA < 5:238032/147‑1 GTGCGCGCGAACACCGGCGAAGCCGGTGCAATTCCGTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTTGAACTTGG < 6:141664/128‑1 GTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGA > 6:222747/1‑149 GTGCCAGCGAACACCGGCGAAGCCGGTGCCATTACCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACATGGGCCATTTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTATTGGAACTTGc > 5:141664/1‑127 CGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAA < 5:222747/149‑1 GCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCAC > 5:54176/1‑149 GCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCGCCTGTTCTGCCGGCA < 7:175274/149‑1 ACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCGCCTGTTCTGCCGGCACCTTG > 7:161372/1‑148 CATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCGCCTGTTCTGCCGGCACATTGA > 7:4251/1‑148 ACTGGGAAATGCCCAAGTTCCACTACAACGACCAGCAGTGACGCAATTTACAAGCGCAACATGGCCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5571559‑5571407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCGCCTGTTCTGCCGGCACCTTGA > NC_002947/5571492‑5571637 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |