New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874726 =	66 (1.230)	5 (0.100)	5/254	NT	7.1%	coding (1445/1515 nt)	ilvA‑II	threonine deaminase
	?	NC_002947	5874768 =	67 (1.290)					coding (1403/1515 nt)	ilvA‑II	threonine deaminase

GGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5874768‑5874726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGG  >  NC_002947/5874768‑5874912                                                                                                                                                                                              GGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTG                                                  <  5:91196/140‑1 GGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTG                                                  >  6:91196/1‑140  GCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAG                                                            <  3:185480/129‑1  GCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAG                                                            >  4:185480/1‑129     GCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTC                                     >  1:91387/1‑149                                        CAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGCTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGG  <  8:199210/149‑1                                                                                                                                                                                              GGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5874768‑5874726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGG  >  NC_002947/5874768‑5874912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.