New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5943622	29 (0.540)	5 (0.110)	4/220	NT	15.3%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5943643	31 (0.690)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein

CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5943454‑5943622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtaaacccTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC  <  NC_002947/5943643‑5943497                                                                                                                                                                                                                                                                                                                              CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCGAGGTAAGGCAGTAGCG                                                                                                                                                                         >  4:252681/1‑149 CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGC                                                                                                                                                                          >  3:114348/1‑148   AGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCTCAGACTTATCGACTGCGAGATGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGTCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGC                                                                                                                                                                       <  5:11757/149‑1   AGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGC                                                                                                                                                                       <  1:94649/149‑1        TTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCT                                                                                                                                                                   <  1:250262/148‑1            CCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGC                                                                                                                                                               <  6:8137/148‑1             CTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGG                                                                                                                                                             <  7:91535/149‑1                GCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGT                                                                                                                                                           >  5:319696/1‑148                   TGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAAC                                                                                                                                                       >  4:64540/1‑149                    GCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACC                                                                                                                                                      >  4:241927/1‑149                      CGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCT                                                                                                                                                    >  6:287407/1‑149                               GTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCG                                                                                                                                           >  6:143200/1‑149                                                   AGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACC                                                                                                                       <  5:143200/149‑1                                                    GACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCC                                                                                                                      <  5:287407/149‑1                                                    GACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCC                                                                                                                      <  3:64540/149‑1                                                            CACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGA                                                                                                               <  5:170589/148‑1                                                                                                                                 TGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAAC                                                                                                                                                       >  4:316084/1‑39                                                                                                                                                       CCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGT                   <  5:325672/149‑1                                                                                                                                                         TCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGG                 >  5:226640/1‑149                                                                                                                                                           TTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGA                >  3:290328/1‑148                                                                                                                                                              GCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAG            >  5:219858/1‑149                                                                                                                                                              GCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAG            >  6:319696/1‑149                                                                                                                                                                 GGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCT         >  8:232430/1‑149                                                                                                                                                                  GTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGAACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTG        >  6:155853/1‑149                                                                                                                                                                   TAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGC       >  1:317150/1‑149                                                                                                                                                                     AACCCTGCAGGGGCGCCTTTAGGAGGGGGTTTACCGGCCAACAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGA     <  6:20085/149‑1                                                                                                                                                                       CCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACA   >  8:88649/1‑149                                                                                                                                                                        CCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC  >  3:276293/1‑149                                                                                                                                                                         CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCT                                             >  6:95318/1‑105                                                                                                                                                                         CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCT                                             <  5:95318/105‑1                                                                                                                                                                         CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCATTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGC       <  7:114357/143‑1                                                                                                                                                                         CTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCATTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGC       >  8:114357/1‑143                                                                                                                                                                                                                                                                                                                              CCAGCTGTTTGCCTGGCATGCCGAGGGCAAGTTGAAGCCGCTGGTGTCGCAGACTTATCCACTGGCAGAAGCCGGGGTTGCTATCGAGAAGCTGGGGCAACGGCAGGCTGTGGGTAAGTTGGTGGTGCTGGCCAGGTAAGGCAGTAGCGGCCTCTTCGCGGGTAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5943454‑5943622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtaaacccTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGCTACTGCCTTACCTGGCCAGCACCACCAACTTACCCACAGCCTGCCGTTGCCCCAGCTTCTCGATAGCAACCCCGGCTTCTGCCAGTGGATAAGTCTGCGACAC  <  NC_002947/5943643‑5943497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.