New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5989267 =	72 (1.340)	3 (0.060)	3/236	NT	5.1%	noncoding (16/87 nt)	PP_mr64	C4 ncRNA
	?	NC_002947	5989342 =	48 (1.000)					coding (53/399 nt)	PP_5247	hypothetical protein

GGGAGGGGTGGATCGGGGACGATTCTTTTCATGGCAATTCCTTCTCCAGGATTGAACTGCAACCACCCGTTTCCACGCAGAAGGCGGCAGTTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCACAACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5989426‑5989267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcacaactgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCGTGAA  >  NC_002947/5989342‑5989489                                                                                                                                                                                                                                                                                                                      GGGAGGGGTGGATCGGGGACGATTCTTTTCATGGCAATTCCTTCTCCAGGATTGAACTGCAACCACCCGTTTCCACGCAGAAGGCGGCAGTTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAACCGGCCTCACGC                                                                                                                                                                 >  7:165356/1‑149    AGGGGTGGATCGGGGACGATTCTTTTCATGGCAATTCCTTCTCCAGGATTGAACTGCAACCACCCGTTTCCACGCAGAAGGCGGCAGTTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCA                                                                                                                                                              >  8:220610/1‑149                                              CCAGGATTGAACTGCAACCACCCGTTTCCACGCAGAAGGCGGCAGTTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCACAACTGCC                                                                                                                                                      <  6:272519/115‑1                                                                                           TTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGTCCAAACGGCCTCACGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAA                                                                                       >  1:53654/1‑133                                                                                           TTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAA                                                                                       <  2:53654/133‑1                                                                                             GTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCC                                                                     >  1:58146/1‑149                                                                                                                                                   CGCGCACAACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCAT               >  5:207103/1‑149                                                                                                                                                           ACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACC       <  6:207103/149‑1                                                                                                                                                           ACTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACC       <  8:112190/149‑1                                                                                                                                                            CTGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCG      <  4:310771/149‑1                                                                                                                                                             TGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGCTCCACCCCTCCCCAACACCACACAACGCTCTTT                                            >  1:29570/1‑110                                                                                                                                                             TGCCGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTT                                            <  2:29570/110‑1                                                                                                                                                                CGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCCCACAACGCACTTTAAGCCGCAGCGATGCCGGCCATCCCCCATTATTCACCGGGAA  >  7:302757/1‑149                                                                                                                                                                CGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCGTGAA  <  7:105212/149‑1                                                                                                                                                                                                                                                                                                                      GGGAGGGGTGGATCGGGGACGATTCTTTTCATGGCAATTCCTTCTCCAGGATTGAACTGCAACCACCCGTTTCCACGCAGAAGGCGGCAGTTGTGCGCGGGGTGGAAAACCGGTGAGAAGGCAAGCCGGTAGGCCAAACGGCCTCACGCGCACAACTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5989426‑5989267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcacaactgccGCCTTCTGCGTGGAAACGGGTGGTTGCAGTTCAATCCTGGAGAAGGAATTGCCATGAAAAGAATCGTCCCCGATCCACCCCTCCCCAACACCACACAACGCTCTTTCAGCCGCTGCGATGCCGGCCATCCCCCATTATTCACCGTGAA  >  NC_002947/5989342‑5989489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.