| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5995832 = | 44 (0.820) | 4 (0.080) | 4/248 | NT | 7.8% | coding (1200/1983 nt) | PP_5252 | hypothetical protein |
| ? | NC_002947 | 5995898 = | 53 (1.050) | coding (1134/1983 nt) | PP_5252 | hypothetical protein | |||||
TGCCGCCGACTTCGAGGACTTCCTCGAGCCGCGCCCGGACCTGCCGCAGACCATGGAAGAAGAACTGGAGCCGGTGGTGCGCCACCTGGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5995985‑5995832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcgacCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGCGGCAGAGAACACCAGCATTTCGCCCGCGCCATTGTGGCGCAAGAAGTCGGTACCGCTGTGCAGC > NC_002947/5995898‑5996045 TGCCGCCGACTTCGAGGACTTCCTCGAGCCGCGCCCGGACCTGCCGCAGACCATGGAAGAAGAACTGGAGCCGGTGGTGCGCCACCTGGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATG > 7:230708/1‑148 CGCCGACTTCGAGGACTTCCTCGAGCCGCGCCCGGACCTGCCGCAGACCATGGAAGAAGAACTGGAGCCGGTGGTGCGCCACCTGGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTC > 4:278861/1‑148 CCGACTTCGAGGACTTCCTCGAGCCGCGCCCGGACCTGCCGCAGACCATGGAAGAAGAACTGGAGCCGGTGGTGCGCCACCTGGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGAC < 8:277051/149‑1 GGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGACCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCG > 4:236412/1‑149 TCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGACCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCGATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGC > 8:247744/1‑149 GCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGACCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGCGG > 6:218753/1‑147 CGAATCGATCACGCGCATGCTCGACCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGGCGGCGGCAGAGAACACCAGCATTTCGCCCGCGCCATTGTGGCGC < 3:236412/149‑1 GACCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGCGGCAGAGAACACCAGCATTTCGCCCGCGCCATTGTGGCGCAAGAAGTCGGTACCGCTGTG > 7:169329/1‑147 CCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGCGGCAGAGAACACCAGCATTTCGCCCGCGCCATTGTGGCGCAAGAAGTCGGTACCGCTGTGCAGC > 6:162290/1‑149 TGCCGCCGACTTCGAGGACTTCCTCGAGCCGCGCCCGGACCTGCCGCAGACCATGGAAGAAGAACTGGAGCCGGTGGTGCGCCACCTGGTCGAGCAGCGCTGGCCATTCCGCCTGCACGCCACCTACAACGAATCGATCACGCGCATGCTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5995985‑5995832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcgacCAGGTGGCGCACCACCGGCTCCAGTTCTTCTTCCATGGTCTGCGGCAGGTCCGGGCGCGGCTCGAGGAAGTCCTCGAAGTCGGCGGCAGAGAACACCAGCATTTCGCCCGCGCCATTGTGGCGCAAGAAGTCGGTACCGCTGTGCAGC > NC_002947/5995898‑5996045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |