| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6088213 = | 37 (0.690) | 5 (0.100) | 5/256 | NT | 11.9% | coding (435/1044 nt) | aphA | acetylpolyamine aminohydrolase |
| ? | NC_002947 | 6088266 = | 38 (0.730) | coding (488/1044 nt) | aphA | acetylpolyamine aminohydrolase | |||||
TCGACGTCAAGGATGGCGACCTTGCGTCGGCCTTGGTCGAGGAAGGCCTGGGCGGCGATGGCGGCATTATTCAGATAGCAGTAGCCGCCCATCACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088362‑6088213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTCTACAGCCGCGACGACGT > NC_002947/6088266‑6088413 TCGACGTCAAGGATGGCGACCTTGCGTCGGCCTTGGTCGAGGAAGGCCTGGGCGGCGATGGCGGCATTATTCAGATAGCAGTAGTCGCCCATCACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGG < 6:181725/148‑1 TCACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTT > 7:281501/1‑148 ACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCC < 5:106661/126‑1 ACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCC > 6:106661/1‑126 GGCATGGGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTC < 3:258434/141‑1 GGCATGGGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTC > 4:258434/1‑141 GGCGAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGCCTACTACCACGGCAACGGTACGCAGGACATCTTCTACAGCCGCGACGA > 8:72923/1‑149 GAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTCTACAGCCGCGACGACGT > 3:252493/1‑149 GAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTCTACAGCCGCGACGACGT < 4:32431/149‑1 TCGACGTCAAGGATGGCGACCTTGCGTCGGCCTTGGTCGAGGAAGGCCTGGGCGGCGATGGCGGCATTATTCAGATAGCAGTAGCCGCCCATCACTTCGCCGGCAGCGTGGTGCCCTGGCGGACGGCACAGGGCGAACGCGGCATGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088362‑6088213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAAGTGATGGGCGGCTACTGCTATCTGAATAATGCCGCCATCGCCGCCCAGGCCTTCCTCGACCAAGGCCGACGCAAGGTCGCCATCCTTGACGTCGACTACCACCACGGCAACGGTACGCAGGACATCTTCTACAGCCGCGACGACGT > NC_002947/6088266‑6088413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |