New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	942570 =	33 (0.610)	3 (0.060)	3/252	NT	11.2%	coding (3052/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	943829 =	16 (0.310)					coding (1793/18933 nt)	PP_0806	surface adhesion protein

GAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTG  >  NC_002947/942424‑942709                                                                                                                                                   |                                                                                                                                            atcgaactgaatcccgcacaagccaacggcgaactgctggacgtggttgccatcgatgacggcggcgtttcctcgctgcccgcacagatcaccgcgcccgacatcaccgcccctgccgcaccgaccgaactggcggtgagcgcggaCgg                                                                                                                                           >  2:265952‑M1/147‑149 (MQ=255)  tcgaactgaatcccgcacaagccaacggcgaactgctggacgtggttgccatcgatgacggcggcgtttcctcgctgcccgcacagatcaccgcgcccgacatcaccgcccctgccgcaccgaccgaactggcggtgagcgcggaCgg                                                                                                                                           <  5:146091‑M1/3‑1 (MQ=255)         gaatcccgcacaagccaacggcgaactgctggacgtggttgccatcgatgacggcggcgtttcctcgctgcccgcacagatcaccgcgcccgacatcaccgcccctgccgcaccgaccgaactggcggtgagcgcggaCGGCa                                                                                                                                         <  8:4029‑M1/5‑1 (MQ=255)         gaatcccgcacaagccaacggcgaactgctggacgtggttgccatcgatgacggcggcgtttcctcgctgcccgcacagatcaccgcgcccgacatcaccgcccctgccgcaccgaccgaactggcggtgagcgcggaCGGCa                                                                                                                                         >  7:4029‑M1/139‑143 (MQ=255)                                                                      gATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGa                                                                      >  6:6466/1‑149 (MQ=31)                                                                          cgcACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCAc                                                                  <  8:9345/149‑1 (MQ=32)                                                                           gcACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACg                                                                 >  2:13854/1‑149 (MQ=32)                                                                                   ctgcCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCcagcag                                                         >  5:148064/1‑149 (MQ=32)                                                                                       ccGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCca                                                             >  8:262669/1‑141 (MQ=32)                                                                                       ccGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCca                                                             <  7:262669/141‑1 (MQ=32)                                                                                             cGGCACGGCGGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGtt                                                <  3:210011/148‑1 (MQ=17)                                                                                               gCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGc                                             >  6:59825/1‑149 (MQ=32)                                                                                                 aCGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCtt                                           >  6:67955/1‑149 (MQ=32)                                                                                                    gCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTtgtg                                        >  8:47057/1‑149 (MQ=32)                                                                                                     ccGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGGCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCcagca                                                          <  6:343426/130‑1 (MQ=17)                                                                                                       ggTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCgg                                     <  5:250543/149‑1 (MQ=32)                                                                                                         tGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGa                                   <  5:322893/149‑1 (MQ=32)                                                                                                           aTAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGAtt                                 >  6:289582/1‑149 (MQ=32)                                                                                                               ccctgccgcaccgaccgaactggcggtgagcgcggaCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCTCCGAGTAAACGCCGACCTCATCGATGTCGGAAACGTGCATCAGTTCTCCGTAGTCTTGTGCGGGATTCAGt                             <  8:141130‑M1/113‑1 (MQ=255)                                                                                                                cctgccgcaccgaccgaactggcggtgagcgcggaCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCgg                                     <  7:53885‑M1/105‑1 (MQ=255)                                                                                                                cctgccgcaccgaccgaactggcggtgagcgcggaCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCgg                                     >  8:53885‑M1/36‑140 (MQ=255)                                                                                                                  tGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTc                           >  3:323609/1‑148 (MQ=32)                                                                                                                    ccGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGa                         <  1:66251/148‑1 (MQ=32)                                                                                                                    ccGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGa                         <  3:171159/148‑1 (MQ=32)                                                                                                                    ccGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGa                         <  4:103990/148‑1 (MQ=32)                                                                                                                        ccGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCt                     >  7:307763/1‑148 (MQ=32)                                                                                                                         cgcgCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGa                   <  4:119257/149‑1 (MQ=32)                                                                                                                          gcgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGtt                            >  6:208869/1‑139 (MQ=32)                                                                                                                          gcgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGtt                            <  5:208869/139‑1 (MQ=32)                                                                                                                          gcgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGaa                  <  4:107984/149‑1 (MQ=32)                                                                                                                             cTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCCGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCt               <  5:289582/149‑1 (MQ=17)                                                                                                                                    ccAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTc                           <  7:55654/130‑1 (MQ=32)                                                                                                                                    ccAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTc                           >  8:55654/1‑130 (MQ=32)                                                                                                                                      aGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGc      >  7:116813/1‑149 (MQ=32)                                                                                                                                      aGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGc      <  4:53948/149‑1 (MQ=32)                                                                                                                                       tctcggtcggTGCGGCTGGGGCGGTGTTGTCGGGTGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGc      <  8:120331/146‑1 (MQ=12)                                                                                                                                           ggtcggtGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGc      >  7:120331/1‑144 (MQ=32)                                                                                                                                           ggtcggtGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTg  <  5:6466/148‑1 (MQ=32)                                                                                                                                           ggtcggtGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTg  <  3:43100/148‑1 (MQ=32)                                                                                                                                           ggtcggtGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTg  <  4:112025/148‑1 (MQ=32)                                                                                                                                                   |                                                                                                                                            GAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTG  >  NC_002947/942424‑942709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.