New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1316945	39 (0.720)	4 (0.080)	4/248	NT	9.1%	coding (363/1989 nt)	PP_1150	membrane protein
	?	NC_002947	= 1316968	43 (0.850)					coding (386/1989 nt)	PP_1150	membrane protein

GCACAGTCATGTCGGTGCTGTTCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCA  >  NC_002947/1316800‑1317091                                                                                                                                                  |                                                                                                                                                      gCACAGTCATGTCGGTGCTGTTCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTa                                                                                                                                                     >  5:169081/1‑148 (MQ=255)  cacaGTCATGTCGGTGCTGTTCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTaca                                                                                                                                                   >  5:36257/1‑149 (MQ=255)   acaGTCATGTCGGTGCTGTTCATCGGCCTGTTCGCCCAGA‑CCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACAcc                                                                                                                                                 <  4:126159/149‑1 (MQ=255)            tCGGTGCTGTTCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGat                                                                                                                                         >  2:79130/1‑149 (MQ=255)                 ggatctCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTTGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGatcatc                                                                                                                                     <  1:107415/143‑1 (MQ=255)                        aTCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACATTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGTCCTATGCCTTCGTGCTGGCCGGCTACACCTCAGCGatcatc                                                                                                                                     >  2:107415/1‑141 (MQ=255)                         tCGGCCGGTTCGCCCAGACCCCCGGCCAGATACTGCTTCCCTTGGCGCTTTGGCTGCCGCTGTGTAGCGCAGCGACCACCCAGTAGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACCCCGCAGGGCGCATCGACtggacc                                                                                                                            >  8:244989/1‑144 (MQ=255)                          cGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTgccgg                                                                                                                           <  1:255838‑M2/149‑6 (MQ=255)                           ggCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTgccggc                                                                                                                          >  4:126975‑M2/1‑143 (MQ=255)                             ccTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCaaggcgatgatcgctgcggtgtagccggcca                                                                                                                        <  7:175030‑M1/149‑32 (MQ=255)                                 ttCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCaaggcgatgatcgctgcggtgtagccggccagca                                                                                                                     <  7:38500‑M1/148‑35 (MQ=255)                                 ttCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCAtt                                                                                                                      <  1:79130/147‑1 (MQ=255)                                 ttCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGa                                                                                                                    >  1:53804/1‑149 (MQ=255)                                 ttCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGa                                                                                                                    >  5:30324/1‑149 (MQ=255)                                            ccccGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTg                                                                                                         >  1:332620/1‑148 (MQ=255)                                              ccGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGc                                                                                                        >  7:40694/1‑147 (MQ=255)                                                   cTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCaaggcgatgatcgctgcggtgtagccggccagc                                                                                                                      <  5:72313‑M1/129‑34 (MQ=255)                                                   cTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCaaggcgatgatcgctgcggtgtagccggccagc                                                                                                                      >  6:72313‑M1/1‑96 (MQ=255)                                                     gTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTc                                                                                                >  7:86494/1‑148 (MQ=255)                                                      tttCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTc                                                                                                <  6:245751/147‑1 (MQ=255)                                                      tttCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCg                                                                                               <  5:263188/148‑1 (MQ=255)                                                            cTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAg                                                                                          <  6:30324/147‑1 (MQ=255)                                                             ttACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGcc                                                                                       >  5:274536/1‑149 (MQ=255)                                                               aCCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑Gt                                                                                   >  6:89502/1‑149 (MQ=255)                                                                ccTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTg                                                                                  <  2:277963/149‑1 (MQ=255)                                                                  ttGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCCCAGCGCCTGGGCCTATGCATTCGTGCTGGCCGGCTACACCGCAGCGAACATCACCTTGCCGGCCATTGACCACCCC‑CTCCAAGAATTCAACCAGCCC‑‑GAgga                                                                                >  4:167656/1‑148 (MQ=255)                                                                     gcgaTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCACCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTc                                                                              <  3:167656/148‑1 (MQ=255)                                                                       gcTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCt                                                                           <  5:314130/149‑1 (MQ=255)                                                                         tttGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTg                                                                          >  1:24062/1‑148 (MQ=255)                                                                                           ccGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCga                                                                    <  5:245451/136‑1 (MQ=255)                                                                                           ccGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCga                                                                    >  6:245451/1‑136 (MQ=255)                                                                                           ccGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTggg                                                        >  6:137059/1‑148 (MQ=255)                                                                                                  gTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCt                                                <  6:36257/149‑1 (MQ=255)                                                                                                     cACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCtgt                                              <  5:89502/148‑1 (MQ=255)                                                                                                        ccAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTgg                                                         >  7:10999/1‑134 (MQ=255)                                                                                                        ccAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTgg                                                         <  8:10999/134‑1 (MQ=255)                                                                                                                 cAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAAcagccag                                   >  2:265223/1‑147 (MQ=255)                                                                                                                 cAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCcagca                                 <  8:40694/149‑1 (MQ=255)                                                                                                                  aGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCcagcag                                >  3:318739/1‑149 (MQ=255)                                                                                                                       cTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCt                           >  2:324545/1‑149 (MQ=255)                                                                                                                               aTGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTgg                   <  2:255838/149‑1 (MQ=255)                                                                                                                                    ttagTGCTGGACGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGTTATTTTCTGTGCaa                                          >  6:266808/4‑121 (MQ=255)                                                                                                                                    ttCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCaa                                          <  5:266808/121‑1 (MQ=255)                                                                                                                                        tGCTGGCCGGCTACACCGCAGCGATCATCGCCTTgccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacaggccgggggtctgggcgaa              <  7:38500‑M2/148‑115 (MQ=255)                                                                                                                                        tGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCgg          <  6:306612/149‑1 (MQ=255)                                                                                                                                         gCTGGCCGGCTACACCGCAGCGATCATCGCCTTgccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacag                                >  6:72313‑M2/1‑33 (MQ=255)                                                                                                                                         gCTGGCCGGCTACACCGCAGCGATCATCGCCTTgccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacag                                <  5:72313‑M2/129‑97 (MQ=255)                                                                                                                                           tGGCCGGCTACACCGCAGCGATCATCGCCTTgccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacaggccgggggtctgggcgaacagg          <  7:175030‑M2/149‑119 (MQ=255)                                                                                                                                           tGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCCATGGGGCTGGCTGTACCGAGATCTGGCGGGGTATTTTGTGTGCAACCGCCAGCAGTGCCTTGCTATGGCCCATGCggg         >  1:275272/1‑149 (MQ=255)                                                                                                                                           tGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTc       >  1:53214/1‑149 (MQ=255)                                                                                                                                             gCCGGCaaggcgatgatcgctgcggtgtagccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacaggccgggggtctgggcgaacaggcc        >  4:126975‑M1/1‑6 (MQ=255)                                                                                                                                             gCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGa     <  4:318739/149‑1 (MQ=255)                                                                                                                                              ccGGCaaggcgatgatcgctgcggtgtagccggccagcacgaaggcataggcccaggcgctgcgcaactgggtggacgctgcggtacacagcgccagccaaagcgccaaggtaagcagaaacaggccgggggtctgggcgaacaggccg       <  1:255838‑M1/149‑145 (MQ=255)                                                                                                                                              ccGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCCTCTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTc       >  1:74854/1‑147 (MQ=255)                                                                                                                                               cGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGagc   <  2:53804/149‑1 (MQ=255)                                                                                                                                                ggCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGagca  <  3:34174/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      GCACAGTCATGTCGGTGCTGTTCATCGGCCTGTTCGCCCAGACCCCCGGCCTGTTTCTGCTTACCTTGGCGCTTTGGCTGGCGCTGTGTACCGCAGCGTCCACCCAGTTGCGCAGCGCCTGGGCCTATGCCTTCGTGCTGGCCGGCTACACCGCAGCGATCATCGCCTTGCCGGCCATTGACCACCCC‑CTGCAAGTATTCGACCAGGCC‑‑GTGGCTCGCTGTACCGAGATCTGCCTGGGTATTTTCTGTGCAACAGCCAGCAGTGCCTTGCTCTGGCCCATGCGGGTCGAGCA  >  NC_002947/1316800‑1317091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.