New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1380487 =	44 (0.820)	5 (0.100)	4/240	NT	12.7%	intergenic (‑213/+49)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380526 =	29 (0.590)					intergenic (‑252/+10)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met

ACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTG  >  NC_002947/1380341‑1380635                                                                                                                                                    |                                                                                                                                                      gaaaaatcaaagcctagcgcttgacatacaaaccacacactgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagaa                                                                                                                                                      <  5:77904‑M1/2‑1 (MQ=255)  aaaaatcaaagcctagcgcttgacatacaaaccacacactgtagaatccgccccactgacgcgggatggagcagcctcgtacctcgtcgggctcataacccgaaggtcgtcggttcaaatccgggtcccgcaaccatattcgtcagaa                                                                                                                                                      <  7:306062‑M1/2‑1 (MQ=255)        cAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAAcccc                                                                                                                                              >  6:295460/1‑149 (MQ=255)         aaagcctagcgcttgacatacaaaccacacactgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAAcccc                                                                                                                                              >  8:38449‑M1/140‑149 (MQ=255)         aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAGAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAAcccc                                                                                                                                              >  1:70785/1‑149 (MQ=255)         aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAAcccc                                                                                                                                              <  2:70785/148‑1 (MQ=255)         aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcg                                                                                                                                             >  7:212296/1‑149 (MQ=255)         aaTGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcg                                                                                                                                             >  8:37382/1‑149 (MQ=255)                   cGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCtttt                                                                                                                                  <  5:141381/149‑1 (MQ=255)                   cGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCttt                                                                                                                                   <  1:123695/148‑1 (MQ=255)                   cGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCtt                                                                                                                                    <  1:274357/147‑1 (MQ=255)                        tCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTaca                                                                                                                               >  8:270150/1‑147 (MQ=255)                            gCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCg                                                                                                                         >  5:320661/1‑149 (MQ=255)                              gTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCggg                                                                                                                       >  1:87842/1‑149 (MQ=255)                              gTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCggg                                                                                                                       <  5:250643/149‑1 (MQ=255)                              gTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCggg                                                                                                                       <  5:196026/149‑1 (MQ=255)                                 tGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGt                                                                                                                     <  8:212296/148‑1 (MQ=255)                                       ggCTTGGGAGGGTTA‑AATATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGTGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCt                                                                                                              <  6:333499/149‑1 (MQ=255)                                       actgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTc                                                                                                               >  1:201353‑M1/110‑149 (MQ=255)                                           tagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTCGCTTTTACACAGGCGGGGTTTGTTCTGa                                                                                                            >  1:20925‑M1/106‑149 (MQ=255)                                           tagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGa                                                                                                            <  2:20925‑M1/43‑1 (MQ=255)                                                  gTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATgg                                                                                                   <  6:320661/149‑1 (MQ=255)                                                     a‑aaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGtt                                                                                                 <  4:156544/148‑1 (MQ=255)                                                        aGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCg                                                                                              <  5:295460/149‑1 (MQ=255)                                                         gATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACTAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCgg                                                                                             <  8:158260/149‑1 (MQ=255)                                                         gATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCgg                                                                                             <  1:310119/149‑1 (MQ=255)                                                             gTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAg                                                                                          <  6:202529/148‑1 (MQ=255)                                                              ttCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGcc                                                                                        >  6:286945/1‑149 (MQ=255)                                                              ttCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGcc                                                                                        >  3:270228/1‑149 (MQ=255)                                                              gcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTc                                                                                                               >  4:249759‑M1/87‑126 (MQ=255)                                                              gcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTc                                                                                                               <  3:249759‑M1/40‑1 (MQ=255)                                                                 aTCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGa                                                                                     <  5:237579/149‑1 (MQ=255)                                                                         cACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAcc                                                                             >  1:150278/1‑149 (MQ=255)                                                                           cGACATCTCAAGCCTGCGGGTTGGCATGAGGGGACGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcga                                                                           >  4:295374/1‑149 (MQ=255)                                                                              cATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcgacga                                                                        <  3:211330/149‑1 (MQ=255)                                                                                    aaGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCg                                                                  >  6:285734/1‑149 (MQ=255)                                                                                    aaGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCg                                                                  <  7:236274/149‑1 (MQ=255)                                                                                       ccTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGt                                                               <  5:286945/149‑1 (MQ=255)                                                                                       ccTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGt                                                               <  7:37382/149‑1 (MQ=255)                                                                                           cGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt                                                            <  4:81138/148‑1 (MQ=255)                                                                                           cGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt                                                            <  2:150278/148‑1 (MQ=255)                                                                                           cGGGGTGGCTTGATGGGAGGGAATATCGAGGCTACGAAAGTCAGTGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACATTCGGGTTAt                                                            <  4:183930/148‑1 (MQ=38)                                                                                                      gaggggagggAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga                                                 <  4:270228/148‑1 (MQ=255)                                                                                                         gggagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGCCGACCTTCGGGTTATGAGCCCGACGAGCTa                                             >  5:266279/1‑149 (MQ=255)                                                                                                                  aaTCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctgc                                    >  6:302072/1‑149 (MQ=255)                                                                                                                         gCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATcc                             <  2:87842/149‑1 (MQ=255)                                                                                                                              gaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGGGGGAGCCGGATTTGAACCGACGTCCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGt                        <  3:295374/149‑1 (MQ=255)                                                                                                                                 aGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAg                     >  3:83883/1‑149 (MQ=255)                                                                                                                                     aGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTggg                 >  8:35660/1‑149 (MQ=255)                                                                                                                                       ggAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGc               >  2:63051/1‑149 (MQ=255)                                                                                                                                           gTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGAt           >  2:194033/1‑149 (MQ=255)                                                                                                                                             ataAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCACGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTc         >  1:31609/1‑149 (MQ=255)                                                                                                                                                    AACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAgtg  <  4:164741‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTA‑AAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCT‑GCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTG  >  NC_002947/1380341‑1380635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.