| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1671421 = | 51 (0.950) | 4 (0.080) | 4/248 | NT | 8.7% | coding (1468/1806 nt) | PP_1467 | NhaP‑type Na+(K+)/H+ antiporter |
| ? | NC_002947 | 1671465 = | 36 (0.710) | coding (1424/1806 nt) | PP_1467 | NhaP‑type Na+(K+)/H+ antiporter | |||||
GGCGCCTTGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGAGCCCGTC > NC_002947/1671275‑1671565 | ggCGCCTTGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑g > 7:26501/1‑148 (MQ=255) ttgctgacggactccagctgggaaaacatccgcgccgcacgcatggacgggctcacgacctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggtcggcctcgggcacttgctgggcctctctcccgccggC‑‑‑‑‑‑‑g > 1:233754‑M1/147‑148 (MQ=255) gcgcCTTGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑Ga > 2:335542/1‑148 (MQ=255) cgcCTTGATGCAGACGGTTGGGCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑Gaaa < 5:15335/149‑1 (MQ=255) ctgacggactccagctgggaaaacatccgcgccgcacgcatggacgggctcacgacctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggtcggcctcgggcacttgctgggcctctctcccgccggC‑‑‑‑‑‑‑GAAAt > 3:35558‑M1/144‑149 (MQ=255) cTTGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCa < 4:30142/149‑1 (MQ=255) ttGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCAt > 2:274050/1‑149 (MQ=255) aTGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGa < 6:318651/148‑1 (MQ=255) gTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTgg < 2:208098/149‑1 (MQ=255) ttGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTGAGTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTgg > 1:89258/1‑149 (MQ=255) ttGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGgc > 6:295017/1‑149 (MQ=255) ttGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGgc > 2:190632/1‑149 (MQ=255) gCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAgg > 7:194664/1‑149 (MQ=255) tCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTAGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGCAGGAACCTGGCGCAGGCCAGGGCATTGAtt > 5:3838/1‑149 (MQ=255) ggTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGcc < 8:26501/149‑1 (MQ=255) gTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCAtt < 2:127266/139‑1 (MQ=255) gTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGagatcggg > 1:127266/1‑141 (MQ=255) ggCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCcggcg < 7:160270/148‑1 (MQ=255) gggctcacgacctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggtcggcctcgggcacttgctgggcctctctcccgccggC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGcc < 5:113999‑M1/46‑1 (MQ=255) gggctcacgacctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggtcggcctcgggcacttgctgggcctctctcccgccggC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGcc > 6:113999‑M1/99‑144 (MQ=255) gCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGa < 7:123549/136‑1 (MQ=255) gCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGa > 8:123549/1‑136 (MQ=255) gCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCcggcgg < 3:135194/148‑1 (MQ=255) cccccAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAAAAATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCcggcgg > 1:113587/1‑147 (MQ=255) cgacctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggtcggcctcgggcacttgctgggcctctctcccgccggCTGTGGCCGAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCcggcgg > 7:39839‑M1/92‑149 (MQ=255) aTAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTg > 4:82430/1‑128 (MQ=255) aTAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAgg < 2:89258/149‑1 (MQ=255) aTAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAgg < 5:295017/149‑1 (MQ=255) tAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGc < 3:232701/149‑1 (MQ=255) acctactttggcaacccggcctcgcagcatgccgacgcccatcttgacctggacggcggcgggcccttgcggggccgcgctcccgccggC‑‑‑‑‑‑‑GAAAGCAGGCCGGAACCTGGCGCAGGCCAGGGCATGGATTTCGc < 5:235312‑M1/45‑1 (MQ=255) cccGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGc < 1:335542/148‑1 (MQ=255) cccGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGc < 1:274050/148‑1 (MQ=255) ccGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGa > 8:275905/1‑93 (MQ=255) ccGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGa < 7:275905/93‑1 (MQ=255) g‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGAC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGccc > 5:198386/1‑148 (MQ=255) ttCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGc > 6:157381/1‑149 (MQ=255) gccgccCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGCGAGAGAGGCCCAGCAACTGCCCGAg > 3:70432/1‑143 (MQ=255) gccCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAg < 2:7266/149‑1 (MQ=255) gccCGGTGCTTGTCGCTACGTTGTATCTCCAGCCCACTCGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTTGCGCACGCCAGGGCATTGATTTAGCCGGCGGGAGAGAGGCCCAGCAATTGCCCGAGGCCGACCAg > 3:253500/1‑149 (MQ=255) ggTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTc > 5:67409/1‑148 (MQ=255) cTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGa < 1:190632/148‑1 (MQ=255) ttGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAg < 5:71593/131‑1 (MQ=255) ttGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAg > 6:71593/1‑131 (MQ=255) ttCGCTACGTTGTTTCTCCAGACCACTGGCTATCACTAACAGCCTGCTGTGTCC‑‑‑‑‑‑‑TAAATCATTACGGAACCTTGCGCAGTCCAGGGCATTGATTTCGCCTGCGGGAGAGAGGCACAGCAAGTGCCCGAGGCCGACCAGGTCAAGATgg < 6:261705/147‑1 (MQ=255) gTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGTGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATgg < 5:216890/148‑1 (MQ=255) cTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCCGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATgg > 5:312105/1‑144 (MQ=255) cTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCCGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATgg < 6:312105/144‑1 (MQ=255) cGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCg < 8:194664/147‑1 (MQ=255) gttgttTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCa > 6:40980/1‑149 (MQ=255) cAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATc > 7:133769/1‑42 (MQ=255) cAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATc > 7:262474/1‑42 (MQ=255) cAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATc < 8:133769/42‑1 (MQ=255) cAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATc < 8:262474/42‑1 (MQ=255) cTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGtt < 4:108745/149‑1 (MQ=255) gCTAGCACTACCAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGTATCCTTGCGCAGGCCATGGCATTGATTTCGACGGCGTGAGAGAGGCCCAGCAAGAGCCCGAGGACGACCAGGTCAAGCTGGGCGTCGGCATGCTGCTAGGCCGGGTTGc < 4:253500/148‑1 (MQ=255) gCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGcc < 2:169538/149‑1 (MQ=255) gAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAgg > 2:36378/1‑149 (MQ=255) ccGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGa < 5:157381/149‑1 (MQ=255) ccGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGCAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGACGGCATGCTGCGAGCCCGGGTAGCCAAAGTAGGTCGTGa > 2:143482/1‑149 (MQ=255) gCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGAGcc < 5:40980/149‑1 (MQ=255) ggCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGAGCCCGTc > 6:112387/1‑148 (MQ=255) ggCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGAGCCCGTc < 5:112387/148‑1 (MQ=255) | GGCGCCTTGATGCAGACGGTTGGCCAGTTGCAGATAGGTCATCGGTTTGGCCCCCAATAGATGCCCGCGGTG‑CTCTTCGGCCGCCCGGTGCTTGTCGCTACGTTGTTTCTCCAGACCACTGGCTAGCACGAACAGCCGGCTGTGGCC‑‑‑‑‑‑‑GAAATCATGACGGAACCTGGCGCAGGCCAGGGCATTGATTTCGCCGGCGGGAGAGAGGCCCAGCAAGTGCCCGAGGCCGACCAGGTCAAGATGGGCGTCGGCATGCTGCGAGGCCGGGTTGCCAAAGTAGGTCGTGAGCCCGTC > NC_002947/1671275‑1671565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |