New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1720173 =	53 (0.980)	5 (0.100)	5/250	NT	9.2%	intergenic (‑163/‑88)	PP_1515/PP_1516	Transcriptional regulator, tetR family/RND membrane fusion protein
	?	NC_002947	1720205 =	49 (0.960)					intergenic (‑195/‑56)	PP_1515/PP_1516	Transcriptional regulator, tetR family/RND membrane fusion protein

CCATCTTAACGGGTCAGCTGCGATACGGCTAAAACTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTGGCGGCGT  >  NC_002947/1720026‑1720321                                                                                                                                                    |                                                                                                                                                     gcgcggcgggtggggcggcttcctgaccacacgccgccagaagcagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCa                                                                                                                                                     >  6:120135‑M1/148‑149 (MQ=255)   gcggcgggtggggcggcttcctgaccacacgccgccagaagcagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCAgc                                                                                                                                                   >  8:103136‑M1/146‑149 (MQ=255)   gcggcgggtggggcggcttcctgaccacacgccgccagaagcagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCAgc                                                                                                                                                   <  3:224193‑M1/4‑1 (MQ=255)      ttAACGGGTCAGCTGCGATACGGCTAAAACTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCa                                                                                                                                                >  2:194694/1‑149 (MQ=255)                      gATACGGCTAAAACTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATc                                                                                                                                >  6:112210/1‑149 (MQ=255)                            gCTAAAACTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGCCAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTgcg                                                                                                                          >  8:132167/1‑149 (MQ=255)                               aaaaCTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCt                                                                                                                        >  3:231054/1‑148 (MQ=255)                                aaaCTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGa                                                                                                                      >  6:309048/1‑149 (MQ=255)                                 aaCTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGAt                                                                                                                     >  4:230219/1‑149 (MQ=255)                                  ccgccagaagcagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaacCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGAtt                                                                                                                    >  1:328500‑M1/115‑149 (MQ=255)                                  ccgccagaagcagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaacCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGAtt                                                                                                                    <  1:194869‑M1/35‑1 (MQ=255)                                       cTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTg                                                                                                                            <  5:125236/136‑1 (MQ=255)                                       cTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTg                                                                                                                            >  6:125236/1‑136 (MQ=255)                                        tCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAata                                                                                                               >  7:185464/1‑148 (MQ=255)                                         cacaTTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAAtata                                                                                                             >  1:27580/1‑149 (MQ=255)                                           caTTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATAcc                                                                                                           <  1:305675/149‑1 (MQ=255)                                            cagggcagcggcggcgggcagagcgatggacaaggcatggcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATAcca                                                                                                          >  2:31337‑M1/105‑149 (MQ=255)                                             tttACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATAccag                                                                                                         >  2:112954/1‑149 (MQ=255)                                               acccTGCGGCCTGCCAGCTTTGACTTTATCGTCAGGGTGGGCGTTCATCCGCCTCTTGATCTCACTGGTGCCAGTTGGCTCCATCCATGTCGTCGAAAAATCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATAccagc                                                                                                        <  7:209348/146‑1 (MQ=255)                                                   tGCGGCCTGCCAGCGTTGAGTTGATAGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTa                                                                                                   >  6:135078/1‑149 (MQ=255)                                                    gCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCAGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAGCCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTa                                                                                                   >  6:71952/1‑148 (MQ=255)                                                         cTGCCAGCGTTGAGTTGATCGAGAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAata                                                                                             <  6:293514/149‑1 (MQ=255)                                                            ccAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACAAGCCAGTACAAATAtt                                                                                           >  4:224193/1‑148 (MQ=255)                                                             cAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACAAGCGCATGCCATTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTa                                                                                          >  3:116184/1‑148 (MQ=255)                                                              aGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTaaa                                                                                        >  8:34379/1‑149 (MQ=255)                                                               gCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGGCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGATGATTTAATATACCAGCCAGTACAAATATTAAAt                                                                                       <  8:55008/149‑1 (MQ=255)                                                                cGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAAtg                                                                                      <  8:185464/149‑1 (MQ=255)                                                                  atgagttgaTCGACAGGCTGGGCGTGCAGCCGCCGCATGATCTCACAGGCGCCATAGGGCTCAAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCTGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAAtgtg                                                                                    <  4:35527/148‑1 (MQ=255)                                                                              aCAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGAACTCCGCGaaa                                                                        <  5:112210/149‑1 (MQ=255)                                                                              aCAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCGTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGa                                                                          >  5:342103/1‑147 (MQ=255)                                                                              aCAGGGTGGGCGTTCAGCCGCCGCTTGATCTCAAAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCATCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGNACAAATATTAAATGTGCACTCCGCGaaa                                                                        <  1:194694/149‑1 (MQ=255)                                                                               cAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAg                                                                       >  4:86068/1‑149 (MQ=255)                                                                                 gggTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGa                                                                     <  4:231054/149‑1 (MQ=255)                                                                                  tgTGGGAGTTCAGCCGCCGCTTGATCTCACAGGCTCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGGTGATTTAATATACCAGCCAGTACAAATAtt                                                                                           <  7:204271/125‑1 (MQ=255)                                                                                  ggTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCATGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGAt                                                                    <  8:35143/149‑1 (MQ=255)                                                                                  ggTGGGCGTTCAGCCGCCGCTAGATCTCACACGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACAAGCGCATGCCCTTCCCGGCAACGTTGAGCTGATTTAAAATACCAGCCAGTACAAATAtt                                                                                           >  8:204271/1‑126 (MQ=255)                                                                                   gcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCAGCGCATGCCCTTCCCGGCATCGTTgcgc                                                                                                                         <  7:80316‑M1/30‑1 (MQ=255)                                                                                   gcgcaacatgatgaatcctttcgcggagtgcacatttaatatttgtactggctggtatattaaatCAGCGCATGCCCTTCCCGGCATCGTTgcgc                                                                                                                         >  8:80316‑M1/66‑95 (MQ=255)                                                                                    tGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGAtt                                                                   >  2:333781/1‑148 (MQ=255)                                                                                    tGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATtc                                                                  <  2:27580/149‑1 (MQ=255)                                                                                       gCGTTCAGGCGCCGCTTGATCTCACAGGCGCCAGATGGCTCCAGCCATGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATtcatc                                                               <  4:116184/149‑1 (MQ=255)                                                                                       gCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATtcatc                                                               <  7:34379/149‑1 (MQ=255)                                                                                        cGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATtcatca                                                              >  7:150658/1‑149 (MQ=255)                                                                                          ttCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATg                                                            <  1:112954/149‑1 (MQ=255)                                                                                             ctccgccgCTTGATCTCACATGCGCCAGAGGGCTCCAGCCAGGTAGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATGATGtt                                                          <  3:260077/146‑1 (MQ=255)                                                                                              gccgccGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTgc                                                        >  4:4961/1‑149 (MQ=255)                                                                                                cgccgcTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACAAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGtt                                                          >  4:260077/1‑145 (MQ=255)                                                                                                         aTCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGAt                                                                                                                     <  6:207538/77‑1 (MQ=255)                                                                                                         aTCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGAt                                                                                                                     >  5:207538/1‑77 (MQ=255)                                                                                                           ctcACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTc                                           >  5:81911/1‑149 (MQ=255)                                                                                                              acaGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGTCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGt                                            <  5:135078/145‑1 (MQ=255)                                                                                                              acaGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTGCAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCAt                                        >  5:163040/1‑149 (MQ=255)                                                                                                                aGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCg                                      >  7:145504/1‑149 (MQ=255)                                                                                                                           ggCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCccgcc                           >  4:199152/1‑149 (MQ=255)                                                                                                                                cagccagGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCcgccgccgc                      <  5:309048/149‑1 (MQ=255)                                                                                                                                   ccagGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGc                   <  8:145504/149‑1 (MQ=255)                                                                                                                                      ggTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCt                <  3:86068/149‑1 (MQ=255)                                                                                                                                       gtcgtcGAAAAACCAGCGCATGCCCTTCCCGGCATCTTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGTATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTg               <  8:150658/149‑1 (MQ=255)                                                                                                                                          gtcgAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCt             >  6:313451/1‑148 (MQ=255)                                                                                                                                             gAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCCCTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTg         >  5:251401/1‑149 (MQ=255)                                                                                                                                              aaaaaCCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTgg        >  7:163038/1‑149 (MQ=255)                                                                                                                                               aaaaCCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTggc       >  1:324020/1‑149 (MQ=255)                                                                                                                                                  aCCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTggcggc    <  1:333781/149‑1 (MQ=255)                                                                                                                                                    CAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTGGCGGCgt  >  3:4961‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CCATCTTAACGGGTCAGCTGCGATACGGCTAAAACTAGCTCACATTTACCTGCGGCCTGCCAGCGTTGAGTTGATCGACAGGGTGGGCGTTCAGCCGCCGCTTGATCTCACAGGCGCCAGAGGGCTCCAGCCAGGTCGTCGAAAAACCAGCGCATGCCCTTCCCGGCATCGTTGCGCTGATTTAATATACCAGCCAGTACAAATATTAAATGTGCACTCCGCGAAAGGATTCATCATGTTGCGCCATGCCTTGTCCATCGCTCTGCCCGCCGCCGCTGCCCTGCTTCTGGCGGCGT  >  NC_002947/1720026‑1720321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.