New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1748689 =69 (1.280)4 (0.080) 3/252 NT 5.6% intergenic (‑22/‑310) PP_1548/PP_5744 hypothetical protein/hypothetical protein
?NC_002947 1748732 = 70 (1.360)intergenic (‑65/‑267) PP_1548/PP_5744 hypothetical protein/hypothetical protein

TCGCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGT  >  NC_002947/1748543‑1748835
                                                                                                                                                  |                                                                                                                                                   
agctccggcagccaccgctctttaaaaaccagcagatgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGAt                                                                                                                                                   <  5:155997‑M1/3‑1 (MQ=255)
agctccggcagccaccgctctttaaaaaccagcagatgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGAt                                                                                                                                                   >  5:7350‑M1/147‑149 (MQ=255)
agctccggcagccaccgctctttaaaaaccagcagatgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGAt                                                                                                                                                   >  3:93513‑M1/147‑149 (MQ=255)
  gCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGAtt                                                                                                                                                  <  7:303301/148‑1 (MQ=255)
   tccggcagccaccgctctttaaaaaccagcagatgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGAttt                                                                                                                                                 <  7:301750‑M1/5‑1 (MQ=255)
    cGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTcc                                                                                                                                               <  2:254138/149‑1 (MQ=255)
              ggcgACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGccc                                                                                                                                     >  1:184463/1‑149 (MQ=255)
                   cGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGGAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTg                                                                                                                                <  8:162747/149‑1 (MQ=255)
                    gTAGAAGGCGCCGTAGACGATCGCCTGTATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGc                                                                                                                               >  1:143032/1‑149 (MQ=255)
                      aGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGcc                                                                                                                              >  8:159867/1‑148 (MQ=255)
                      aGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGcc                                                                                                                              >  2:21331/1‑148 (MQ=255)
                        aaGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAg                                                                                                                           <  1:285716/149‑1 (MQ=255)
                           gcgcCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGgcc                                                                                                                        >  4:322681/1‑149 (MQ=255)
                            cgcCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGgcca                                                                                                                       <  4:36289/149‑1 (MQ=255)
                                 tAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGccagccag                                                                                                                  >  4:85054/1‑149 (MQ=255)
                                  gatgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGt                                                                                                                 >  6:283975‑M1/113‑149 (MQ=255)
                                   gACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGt                                                                                                                 <  6:44607/148‑1 (MQ=255)
                                   atgagccaccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTg                                                                                                                >  6:155997‑M1/112‑149 (MQ=255)
                                    aCGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTg                                                                                                                >  3:204575/1‑148 (MQ=255)
                                         cactaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCg                                                                                                          >  6:149045‑M1/106‑149 (MQ=255)
                                         caccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCg                                                                                                          >  6:156358‑M1/106‑149 (MQ=255)
                                          gCCTGTATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCgg                                                                                                         <  2:143032/149‑1 (MQ=255)
                                          gCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCg                                                                                                          <  2:218147/148‑1 (MQ=255)
                                               cATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTg                                                                                                    >  2:212797/1‑149 (MQ=255)
                                                aTCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGc                                                                                                   >  6:276105/1‑149 (MQ=255)
                                                   aGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGTCCAGCCAGTGAAATCGGTGTTGCt                                                                                                  >  4:262713/1‑147 (MQ=255)
                                                     gTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCTAGCCAGTGAAATCGGTGTTGCTCAGc                                                                                              <  1:7928/149‑1 (MQ=255)
                                                        gcgGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCTTGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        >  1:156785/1‑136 (MQ=255)
                                                        gcgGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCCTGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        <  2:156785/136‑1 (MQ=255)
                                                        gcgGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        >  1:322160/1‑136 (MQ=255)
                                                        gcgGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        <  2:322160/136‑1 (MQ=255)
                                                           gTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCt                                                                                        >  2:55568/1‑149 (MQ=255)
                                                            ttCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTg                                                                                       >  7:231355/1‑149 (MQ=255)
                                                                gAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCggg                                                                                   >  4:30517/1‑149 (MQ=255)
                                                                 aaCCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGc                                                                                  >  3:205642/1‑149 (MQ=255)
                                                                  accaccTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGcc                                                                                >  3:7112/1‑149 (MQ=255)
                                                                     accTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGAc                                                                             <  4:228517/149‑1 (MQ=255)
                                                                      ccTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACa                                                                            >  1:180490/1‑149 (MQ=255)
                                                                            ttGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcga                                                                      <  7:159867/149‑1 (MQ=255)
                                                                            ttGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcga                                                                      <  3:85054/149‑1 (MQ=255)
                                                                               cAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCTTCCTCGCTCGACATGTcggcc                                                                    >  4:158474/1‑146 (MQ=37)
                                                                                aGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcga                                                                  <  2:180490/149‑1 (MQ=255)
                                                                                  cgcgGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        <  5:151108/110‑1 (MQ=255)
                                                                                  cgcgGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                        >  6:151108/1‑110 (MQ=255)
                                                                                  cgcgGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGTCCGACATGTcgagcgag                                                                 >  6:222256/1‑148 (MQ=255)
                                                                                     gggCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAgg                                                                >  3:204191/1‑146 (MQ=255)
                                                                                        cTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCtt                                                          <  2:184463/149‑1 (MQ=255)
                                                                                           cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTg                                                         <  5:276105/147‑1 (MQ=255)
                                                                                           cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTg                                                         <  3:114007/147‑1 (MQ=255)
                                                                                           cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGc                                                        >  1:305524/1‑148 (MQ=255)
                                                                                           cACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGc                                                        <  2:278738/148‑1 (MQ=255)
                                                                                                ccTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGtt                                                  <  4:205642/149‑1 (MQ=255)
                                                                                                 cTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTg                                                 >  6:164245/1‑149 (MQ=255)
                                                                                                    tCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCg                                               <  2:305524/148‑1 (MQ=255)
                                                                                                         ccGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGt                                         >  8:58789/1‑149 (MQ=255)
                                                                                                          cGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                        >  3:126261/1‑149 (MQ=255)
                                                                                                          cGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                        >  2:256717/1‑149 (MQ=255)
                                                                                                           gAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                        >  1:162763/1‑148 (MQ=255)
                                                                                                            aaCAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca                                      >  4:131386/1‑149 (MQ=255)
                                                                                                             aCAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                     <  8:231355/149‑1 (MQ=255)
                                                                                                               agatttCCATGGATGGGTTGTTGCTCCGTTGGGTTGTTTTCCCGTCTGGCCCTTTTGCCATGGCCAGCCAGTGAAATCGGTGTTGGTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccacca                                   <  4:170784/146‑1 (MQ=17)
                                                                                                               aGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                     >  5:16789/1‑147 (MQ=255)
                                                                                                                gTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                     >  4:255635/1‑146 (MQ=255)
                                                                                                                    tCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTaa                                            >  2:119622/1‑135 (MQ=255)
                                                                                                                    tCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTaa                                            <  1:119622/135‑1 (MQ=255)
                                                                                                                      cAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTc                             >  7:125979/1‑148 (MQ=255)
                                                                                                                      cAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTc                             >  3:214768/1‑148 (MQ=255)
                                                                                                                       aaGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCa                            >  7:121798/1‑148 (MQ=255)
                                                                                                                        aGCATGGGGTGTTGTGACGTGGGGTTGATTTCCCGTCTGGCCATTTTGACAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAAt                          <  4:214768/149‑1 (MQ=18)
                                                                                                                              gggTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCgg                    <  5:347261/149‑1 (MQ=255)
                                                                                                                              gggTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCg                     <  1:21331/148‑1 (MQ=255)
                                                                                                                               ggTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCtt                                                          >  2:47953/1‑110 (MQ=255)
                                                                                                                               ggTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCtt                                                          <  1:47953/110‑1 (MQ=255)
                                                                                                                               ggTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGa                   <  1:212797/149‑1 (MQ=255)
                                                                                                                                gtgtTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGAt                  >  2:129449/1‑149 (MQ=255)
                                                                                                                                   ttGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTaa               <  1:129449/149‑1 (MQ=255)
                                                                                                                                         cGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCgg          <  3:262713/148‑1 (MQ=255)
                                                                                                                                         cGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGgc         <  2:72086/149‑1 (MQ=255)
                                                                                                                                             gggTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCaa                           <  7:36474/127‑1 (MQ=255)
                                                                                                                                             gggTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCaa                           >  8:36474/1‑127 (MQ=255)
                                                                                                                                             gggTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCt     <  4:204575/149‑1 (MQ=255)
                                                                                                                                               gTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCgg          >  1:270183/1‑142 (MQ=255)
                                                                                                                                               gTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCgg          <  2:270183/142‑1 (MQ=255)
                                                                                                                                                ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt  <  1:256717/149‑1 (MQ=255)
                                                                                                                                                ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt  >  8:254191/1‑149 (MQ=255)
                                                                                                                                                ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt  >  8:258861/1‑149 (MQ=255)
                                                                                                                                                ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt  >  8:301750/1‑149 (MQ=255)
                                                                                                                                                ttGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt  <  6:16789/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TCGCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGT  >  NC_002947/1748543‑1748835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.