New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2360516	37 (0.690)	3 (0.060)	3/256	NT	7.2%	coding (641/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 2360555	42 (0.800)					coding (602/1134 nt)	PP_2075	membrane protein

GGTAGCTGGGTGCTCAGGCGGGGGCGGGGGACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAAC  >  NC_002947/2360378‑2360661                                                                                                                                           |                                                                                                                                                  ggTAGCTGGGTGCTCAGGCGGGGGCGGGGGACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCg                                                                                                                                         >  4:137816/1‑149 (MQ=255)                            gggACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCcg                                                                                                              >  5:307566/1‑149 (MQ=255)                             ggACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTTTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAcgcggctcggcctggtctggcaccccagccgcaccggc                                                                                                             <  4:232645‑M1/149‑39 (MQ=255)                             ggACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCcgc                                                                                                             <  1:285727/149‑1 (MQ=255)                                  gCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcc                                                                                                        <  5:207980‑M2/149‑5 (MQ=255)                                       tgGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAcgcggctcggcctggtctggcaccccagccgcaccggcctgcc                                                                                                        >  1:137768‑M1/1‑101 (MQ=255)                                       tgGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAcgcggctcggcctggtctggcaccccagccgcaccggcctgcc                                                                                                        <  2:137768‑M1/144‑44 (MQ=255)                                               cttcCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCtgagtgag                                                                                           >  5:209148/1‑149 (MQ=255)                                                     tataACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtct                                                                                     >  3:171164/1‑149 (MQ=255)                                                               gATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGTCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGa                                                                           >  4:7308/1‑149 (MQ=255)                                                                 tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTggg                                                                               <  8:146667/143‑1 (MQ=255)                                                                 tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTggg                                                                               >  7:146667/1‑143 (MQ=255)                                                                 tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATg                                                                         >  2:86057/1‑149 (MQ=255)                                                                    aTTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCt                                                                      >  6:247019/1‑149 (MQ=255)                                                                     ttCCCACTCCTCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCTGCAGGGCCATTTCCCTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGATGAGGGAGTCATCTTCTGGGTCGATGGCtg                                                                     <  2:112167/149‑1 (MQ=21)                                                                       cccACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCtgt                                                                    <  6:15398/148‑1 (MQ=255)                                                                        ccACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGTCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCtgtg                                                                   <  3:7308/148‑1 (MQ=255)                                                                         cACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtc                                                                                      <  3:289042/128‑1 (MQ=255)                                                                         cACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtc                                                                                      >  4:289042/1‑128 (MQ=255)                                                                              atcaCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCgg                                                            <  6:207980/149‑1 (MQ=255)                                                                                 aCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttg                                                         <  6:209148/149‑1 (MQ=255)                                                                                 aCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttg                                                         >  2:38314/1‑149 (MQ=255)                                                                                       ttCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTc                                                    >  5:55173/1‑148 (MQ=255)                                                                                         cGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCa                                                  <  1:86057/148‑1 (MQ=255)                                                                                           cTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACgg                                               <  4:171164/149‑1 (MQ=255)                                                                                              ccgccTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttgtt                                                       >  5:118036/1‑138 (MQ=255)                                                                                              ccgccTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttgtt                                                       <  6:118036/138‑1 (MQ=255)                                                                                                  cttggccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTg                                        <  3:137816/149‑1 (MQ=255)                                                                                                       ccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGAt                                   >  7:160317/1‑149 (MQ=255)                                                                                                       ccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGAt                                   >  5:179314/1‑149 (MQ=255)                                                                                                         ttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATgc                                 >  8:110222/1‑149 (MQ=255)                                                                                                               gCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGccgccg                            <  5:247019/148‑1 (MQ=255)                                                                                                                        ggCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCg                  >  8:172721/1‑149 (MQ=255)                                                                                                                           cATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGAAGATGCAGCCGCAGTATTTAGGTc               >  6:234922/1‑149 (MQ=255)                                                                                                                            aTTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTc               >  3:17984/1‑148 (MQ=255)                                                                                                                             tttCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGa             >  7:115777/1‑149 (MQ=255)                                                                                                                                 cATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGt          <  8:160317/148‑1 (MQ=255)                                                                                                                                  aTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAg        <  6:179314/149‑1 (MQ=255)                                                                                                                                  aTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAg        <  6:307566/149‑1 (MQ=255)                                                                                                                                   tgtgAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTc                                                                                         >  8:258748/1‑67 (MQ=255)                                                                                                                                   tgtgAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTc                                                                                         <  7:258748/67‑1 (MQ=255)                                                                                                                                        ggcaggcCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcctcacatggaaatggccctgctgggcaaacaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggccca       <  2:137768‑M2/144‑102 (MQ=255)                                                                                                                                        ggcaggcCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcctcacatggaaatggccctgctgggcaaacaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggccca       >  1:137768‑M2/1‑43 (MQ=255)                                                                                                                                        ggCAcgcggctcggcctggtctggcaccccagccgcaccggcctgcctcacatggaaatggccctgctgggcaaacaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggcccacacgc  <  5:207980‑M1/149‑146 (MQ=255)                                                                                                                                           |                                                                                                                                                  GGTAGCTGGGTGCTCAGGCGGGGGCGGGGGACGGCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAAC  >  NC_002947/2360378‑2360661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.