New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2360516	37 (0.690)	3 (0.060)	3/256	NT	7.2%	coding (641/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 2360555	42 (0.800)					coding (602/1134 nt)	PP_2075	membrane protein

GCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAATGAGCAAGTGACGGC  >  NC_002947/2360411‑2360702                                                                                                                                                 |                                                                                                                                                    gCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcc                                                                                                                                                 <  5:207980‑M2/149‑5 (MQ=255)              cttcCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCtgagtgag                                                                                                                                    >  5:209148/1‑149 (MQ=255)                    tataACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtct                                                                                                                              >  3:171164/1‑149 (MQ=255)                              gATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGTCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGa                                                                                                                    >  4:7308/1‑149 (MQ=255)                                tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTggg                                                                                                                        >  7:146667/1‑143 (MQ=255)                                tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTggg                                                                                                                        <  8:146667/143‑1 (MQ=255)                                tGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATg                                                                                                                  >  2:86057/1‑149 (MQ=255)                                   aTTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCt                                                                                                               >  6:247019/1‑149 (MQ=255)                                    ttCCCACTCCTCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCTGCAGGGCCATTTCCCTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGATGAGGGAGTCATCTTCTGGGTCGATGGCtg                                                                                                              <  2:112167/149‑1 (MQ=21)                                      cccACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCtgt                                                                                                             <  6:15398/148‑1 (MQ=255)                                       ccACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGTCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCtgtg                                                                                                            <  3:7308/148‑1 (MQ=255)                                        cACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtc                                                                                                                               <  3:289042/128‑1 (MQ=255)                                        cACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCAtc                                                                                                                               >  4:289042/1‑128 (MQ=255)                                             atcaCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCgg                                                                                                     <  6:207980/149‑1 (MQ=255)                                                aCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttg                                                                                                  >  2:38314/1‑149 (MQ=255)                                                aCGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttg                                                                                                  <  6:209148/149‑1 (MQ=255)                                                      ttCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTc                                                                                             >  5:55173/1‑148 (MQ=255)                                                        cGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCa                                                                                           <  1:86057/148‑1 (MQ=255)                                                          cTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACgg                                                                                        <  4:171164/149‑1 (MQ=255)                                                             ccgccTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttgtt                                                                                                >  5:118036/1‑138 (MQ=255)                                                             ccgccTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGgttgtt                                                                                                <  6:118036/138‑1 (MQ=255)                                                                 cttggccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTg                                                                                 <  3:137816/149‑1 (MQ=255)                                                                      ccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGAt                                                                            >  7:160317/1‑149 (MQ=255)                                                                      ccttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGAt                                                                            >  5:179314/1‑149 (MQ=255)                                                                        ttgTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATgc                                                                          >  8:110222/1‑149 (MQ=255)                                                                              gCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGccgccg                                                                     <  5:247019/148‑1 (MQ=255)                                                                                       ggCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCg                                                           >  8:172721/1‑149 (MQ=255)                                                                                          cATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGAAGATGCAGCCGCAGTATTTAGGTc                                                        >  6:234922/1‑149 (MQ=255)                                                                                           aTTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTc                                                        >  3:17984/1‑148 (MQ=255)                                                                                            tttCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGa                                                      >  7:115777/1‑149 (MQ=255)                                                                                                cATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGt                                                   <  8:160317/148‑1 (MQ=255)                                                                                                 aTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAg                                                 <  6:179314/149‑1 (MQ=255)                                                                                                 aTGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAg                                                 <  6:307566/149‑1 (MQ=255)                                                                                                  tgtgAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTc                                                                                                                                  <  7:258748/67‑1 (MQ=255)                                                                                                  tgtgAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTc                                                                                                                                  >  8:258748/1‑67 (MQ=255)                                                                                                       ggcaggcCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcctcacatggaaatggccctgctgggcaaacaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggccca                                                <  2:137768‑M2/144‑102 (MQ=255)                                                                                                       ggcaggcCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcctcacatggaaatggccctgctgggcaaacaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggccca                                                >  1:137768‑M2/1‑43 (MQ=255)                                                                                                            gcCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGtgcctcacatggaaatggccctgctgggcaaaaaaggccaaggcggcagcgaactgcgtgatgagtgggaattcatccgtcgttatatggaagaaggcccacacgccgtcc                                      <  4:232645‑M2/149‑112 (MQ=255)                                                                                                              cGGTGCGGCTGGGGAGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTgg                                    <  2:279711/149‑1 (MQ=255)                                                                                                                   cGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTAc                               >  4:303293/1‑149 (MQ=255)                                                                                                                         gggTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGAt                          <  7:172721/148‑1 (MQ=255)                                                                                                                            tGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGaa                      <  3:303293/149‑1 (MQ=255)                                                                                                                                    cAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCAACGGGAAAGTGACGATGACGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAAtta              <  5:234922/149‑3 (MQ=255)                                                                                                                                      ggCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAAt                >  6:19982/1‑145 (MQ=255)                                                                                                                                      ggCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAAt                <  5:19982/145‑1 (MQ=255)                                                                                                                                         cGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGTGTTACTCGATTGAATCGAATGAGCAAg         >  5:82301/1‑149 (MQ=255)                                                                                                                                                 gTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAATGAGCAAGTGACGGc  >  6:347124/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GCGTGTGGGCCTTCTTCCATATAACGACGGATGAATTCCCACTCATCACGCAGTTCGCTGCCGCCTTGGCCTTGTTTGCCCAGCAGGGCCATTTCCATGTGAGGCAGGCCGGTGCGGCTGGGGTGCCAGACCAGGCCGAGCCGCGTGCCCACGCTGAGTGAGTCATCTTCTGGGTCGATGGCTGTGCTTCCGGTTGTTTTCCACGGGAAAGTGACGATGCCGCCGCAGTATTTCGGTCGATGTAGGTGAACTTGTTGGGTTACTCGATTGAATCGAATGAGCAAGTGACGGC  >  NC_002947/2360411‑2360702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.