New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3192896 =	39 (0.720)	3 (0.060)	3/252	NT	8.0%	coding (565/1425 nt)	prr	gamma‑aminobutyraldehyde dehydrogenase
	?	NC_002947	3192940 =	32 (0.620)					coding (521/1425 nt)	prr	gamma‑aminobutyraldehyde dehydrogenase

TCGGCCGTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACC  >  NC_002947/3192748‑3193043                                                                                                                                                     |                                                                                                                                                     agtacatcccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcc                                                                                                                                                      >  6:303149‑M1/149‑149 (MQ=255)   ggCCGTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGa                                                                                                                                                    <  8:207525/149‑1 (MQ=255)     catcccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAg                                                                                                                                                   >  8:70939‑M1/145‑148 (MQ=255)     caaccccgggcacaactcgatgatccgccgctacgcggacggtgtcctcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAg                                                                                                                                                   <  2:70556‑M1/4‑1 (MQ=255)      atcccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCa                                                                                                                                                 <  6:164118‑M1/6‑1 (MQ=255)      atcccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCa                                                                                                                                                 <  6:131208‑M1/6‑1 (MQ=255)      atcccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaacgacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCa                                                                                                                                                 <  4:41622‑M1/6‑1 (MQ=255)       gTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCg                                                                                                                                                     <  5:24702/144‑1 (MQ=255)       gTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCg                                                                                                                                                     <  5:21765/144‑1 (MQ=255)       gTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCg                                                                                                                                                     >  6:24702/1‑144 (MQ=255)       gTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCg                                                                                                                                                     >  6:21765/1‑144 (MQ=255)        tGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGACTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGt                                                                                                                                               >  2:189305/1‑149 (MQ=255)         ccggggcacacctcgatgatccgccgcgacgcggtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGtt                                                                                                                                              <  2:55926‑M1/9‑1 (MQ=255)           cTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTcc                                                                                                                                            <  8:214619/149‑1 (MQ=255)              cGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTccccc                                                                                                                                         >  5:218660/1‑149 (MQ=255)              cGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTcccc                                                                                                                                          >  4:141456/1‑148 (MQ=255)                 tgatgCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGc                                                                                                                                     <  2:193496/149‑1 (MQ=255)                    tgCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCtt                                                                                                                                   >  4:174318/1‑148 (MQ=255)                      cGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCaa                                                                                                                                <  6:96030/149‑1 (MQ=255)                        gCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGTGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAgg                                                                                                                              >  3:32325/1‑149 (MQ=255)                                  cgtacgGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCg                                                                                                                     <  6:218660/148‑1 (MQ=255)                                    tacgGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCgggg                                                                                                                  <  6:176750/149‑1 (MQ=255)                                       ggAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGgtgt                                                                                                               >  4:191723/1‑149 (MQ=255)                                       ggAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGACTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGgtgt                                                                                                               <  1:189305/149‑1 (MQ=255)                                        gAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGtgtg                                                                                                              >  5:271142/1‑149 (MQ=255)                                        gAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGtgtg                                                                                                              <  5:303782/149‑1 (MQ=255)                                         aaCCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGc                                                                                                             <  6:277826/149‑1 (MQ=255)                                          gtcggtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCt                                                                                                            <  4:284009‑M1/42‑1 (MQ=255)                                          aCCGGTCAGCGATACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCt                                                                                                            >  3:320841/1‑149 (MQ=255)                                             ggTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCg                                                                                                          >  5:176538/1‑148 (MQ=255)                                              gtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGa                                                                                                        >  3:284009‑M1/104‑149 (MQ=255)                                              gTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACAGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCg                                                                                                          >  6:281771/1‑147 (MQ=255)                                               tgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAg                                                                                                       >  1:55926‑M1/103‑149 (MQ=255)                                               tCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAg                                                                                                       >  5:96339/1‑149 (MQ=255)                                                 aGCGACACCATGCTCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAATGTGCTCATCGGGGTGTGCTCGGAgg                                                                                                      <  6:271142/148‑1 (MQ=255)                                                                aCCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCGGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt                                                                                      <  4:320841/149‑1 (MQ=255)                                                                               gTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGcc                                                                         >  3:169079/1‑147 (MQ=255)                                                                                 cAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCAGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAgg                                                                     >  2:193125/1‑149 (MQ=255)                                                                                    cGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAggccg                                                                  <  2:159458/149‑1 (MQ=255)                                                                                      gCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgtgt                                                                                    >  1:73602/1‑129 (MQ=255)                                                                                      gCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgtgt                                                                                    <  2:73602/129‑1 (MQ=255)                                                                                       cTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAggccgggc                                                               <  3:174318/149‑1 (MQ=255)                                                                                              accGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAg                                                                      >  8:308233/1‑135 (MQ=255)                                                                                              accGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAg                                                                      <  7:308233/135‑1 (MQ=255)                                                                                                      gccgcgccCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCAcgccg                                                >  2:221976/1‑149 (MQ=255)                                                                                                             ccATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAg                                         <  4:32325/149‑1 (MQ=255)                                                                                                                  aaCGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt                                                                                      >  2:208158/1‑99 (MQ=255)                                                                                                                  aaCGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt                                                                                      <  1:208158/99‑1 (MQ=255)                                                                                                                     gATATTGACCA‑CCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCCGAGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACggg                                  >  1:70556/1‑148 (MQ=255)                                                                                                                         ttGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGt                              <  4:169079/148‑1 (MQ=255)                                                                                                                            cccaccCCGGCGGGGAAGAAATCGGCGAGCAGTTCCCCC‑AGCGTCAAGGGGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCa                          <  8:309953/148‑1 (MQ=255)                                                                                                                            accaccCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCa                          >  5:164118/1‑149 (MQ=255)                                                                                                                                 cccGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGgcg                     <  3:141456/149‑1 (MQ=255)                                                                                                                                         ggAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAg             <  6:96339/149‑1 (MQ=255)                                                                                                                                                 tCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGTCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCgacgac     >  1:51910/1‑149 (MQ=255)                                                                                                                                                 tCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGCTAGTTCCACGGCGCGATGGAGGcgacga      <  1:193125/148‑1 (MQ=255)                                                                                                                                                   ggCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGacac   <  1:221976/149‑1 (MQ=255)                                                                                                                                                    gCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGTCGCCATCAGCAACGGGTAGTTCCACGGCGCTATGGAGGCGACGACacc  <  2:51910/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TCGGCCGTGCCTTCGATGATGCGGCTTCCGGTACGTACGGAACCGGTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACC  >  NC_002947/3192748‑3193043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.