| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3192896 = | 39 (0.720) | 3 (0.060) | 3/252 | NT | 8.0% | coding (565/1425 nt) | prr | gamma‑aminobutyraldehyde dehydrogenase |
| ? | NC_002947 | 3192940 = | 32 (0.620) | coding (521/1425 nt) | prr | gamma‑aminobutyraldehyde dehydrogenase | |||||
GTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGATGTACT > NC_002947/3192793‑3193087 | gtgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGa > 3:284009‑M1/104‑149 (MQ=255) tgtcgtcgcctccatcgcgccgtggaactacccgttgctgatggcggcgtggaagctcggcccggccttggccggcggcaacaccgtggtcctgaagccctcCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAg > 1:55926‑M1/103‑149 (MQ=255) tCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAg > 5:96339/1‑149 (MQ=255) aGCGACACCATGCTCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAATGTGCTCATCGGGGTGTGCTCGGAgg < 6:271142/148‑1 (MQ=255) aCCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCGGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt < 4:320841/149‑1 (MQ=255) gTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGcc > 3:169079/1‑147 (MQ=255) cAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCAGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAgg > 2:193125/1‑149 (MQ=255) cGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAggccg < 2:159458/149‑1 (MQ=255) gCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgtgt > 1:73602/1‑129 (MQ=255) gCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgtgt < 2:73602/129‑1 (MQ=255) cTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAggccgggc < 3:174318/149‑1 (MQ=255) accGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAg < 7:308233/135‑1 (MQ=255) accGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAg > 8:308233/1‑135 (MQ=255) gccgcgccCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCAcgccg > 2:221976/1‑149 (MQ=255) ccATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAg < 4:32325/149‑1 (MQ=255) aaCGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt < 1:208158/99‑1 (MQ=255) aaCGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGgt > 2:208158/1‑99 (MQ=255) gATATTGACCA‑CCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCCGAGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACggg > 1:70556/1‑148 (MQ=255) ttGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGt < 4:169079/148‑1 (MQ=255) cccaccCCGGCGGGGAAGAAATCGGCGAGCAGTTCCCCC‑AGCGTCAAGGGGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCa < 8:309953/148‑1 (MQ=255) accaccCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCa > 5:164118/1‑149 (MQ=255) cccGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGgcg < 3:141456/149‑1 (MQ=255) ggAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAg < 6:96339/149‑1 (MQ=255) tCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGTCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCgacgac > 1:51910/1‑149 (MQ=255) tCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGCTAGTTCCACGGCGCGATGGAGGcgacga < 1:193125/148‑1 (MQ=255) ggCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGacac < 1:221976/149‑1 (MQ=255) ctccgagcacaccccgatgagcaccttgaagctgggggaactgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGaca > 1:55926‑M2/48‑149 (MQ=255) tccgagcacaccccgatgagcaccttgaagctgggggaactgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGacac > 3:284009‑M2/47‑149 (MQ=255) gCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGTCGCCATCAGCAACGGGTAGTTCCACGGCGCTATGGAGGCGACGACacc < 2:51910/149‑1 (MQ=255) agcacaccccgatgagcaccttgaagctgggggaactgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACaccgac < 4:284009‑M2/107‑1 (MQ=255) AGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGTGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACcgc > 5:281771‑M1/1‑149 (MQ=255) ttCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCAt < 8:128670/99‑1 (MQ=255) ttCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCAt > 7:128670/1‑99 (MQ=255) c‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCgcggc > 3:41622/1‑149 (MQ=255) c‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCgcggc > 5:131208/1‑149 (MQ=255) tacAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGat > 5:88113/3‑149 (MQ=255) cAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGatc < 3:191723/148‑1 (MQ=255) aGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGatcatc > 4:307651/1‑149 (MQ=255) aTCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGtgtg > 7:20522/1‑149 (MQ=255) cGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGcc > 6:164575/1‑149 (MQ=255) aactgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCgg < 2:55926‑M2/140‑1 (MQ=255) tgtgCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCgg > 7:222708/1‑148 (MQ=255) tgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTCGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGAt < 4:41622‑M2/143‑1 (MQ=255) tgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGAt < 6:164118‑M2/143‑1 (MQ=255) tgctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGAt < 6:131208‑M2/143‑1 (MQ=255) ctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGAGGACACCGTCCGCGTAGCGGCGGATCATCGAGTTGTGCCCGGGGTTg < 2:70556‑M2/144‑1 (MQ=255) ctcgGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGATg > 8:70939‑M2/5‑148 (MQ=255) gGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGATGTACt > 6:303149‑M2/2‑149 (MQ=255) | GTCAGCGACACCATGCGCACCAGAGCATGACTGGTCAGCGGCTCACCCACCGTGGCGCCGCGCCCATGAACGATATTGACCACCCCGGCGGGGAAGATATCGGCGAGCAGTTCCCCC‑AGCTTCAAGGTGCTCATCGGGGTGTGCTCGGAGGGCTTCAGGACCACGGTGTTGCCGCCGGCCAAGGCCGGGCCGAGCTTCCACGCCGCCATCAGCAACGGGTAGTTCCACGGCGCGATGGAGGCGACGACACCGACCGCGTCGCGGCGGATCATCGAGGTGTGCCCCGGGATGTACT > NC_002947/3192793‑3193087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |