New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3230543 = | 47 (0.870) | 4 (0.080) | 4/256 | NT | 8.1% | coding (840/1353 nt) | PP_2830 | MFS transporter |
? | NC_002947 | 3230606 = | 45 (0.860) | coding (777/1353 nt) | PP_2830 | MFS transporter |
GAGGTGGCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGTCAGCCAAGGC > NC_002947/3230397‑3230687 | gAGGTGGCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTg < 1:93099/149‑1 (MQ=255) cctgcccgccgtagccttggcctatgtggtgtggaagaagctgccggacggtccggcctcggcgccttggctgacggctgccgacgcccaggacatcgagcgccgcctggccgcagagcaggccgccgcaccgcagcagagcaagCTgg > 7:189744‑M1/146‑149 (MQ=255) ggTGGCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGt < 2:183846/149‑1 (MQ=255) ctgccagccgtagccttggcctatgtggtgtggaagaagctgccggacggtccggcctcggcgccttggctgaccgctgccgacgcccaggacatcgagcgccgcctggccgcagagcagcccgccgcaccgcagcagagcaagctgcg < 2:309529‑M1/5‑3 (MQ=255) gTGGCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACTGTGTAGATGGTGATCTGGTg > 1:175820/1‑149 (MQ=255) gCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCCCCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCag > 8:128398/1‑148 (MQ=255) gCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCACGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCAc < 5:163768/149‑1 (MQ=255) ggCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAg < 4:288978/149‑1 (MQ=255) gCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGt < 5:9651/149‑1 (MQ=255) cGTGGCAAGGTCGCTGCACGAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTa < 4:120574/149‑1 (MQ=255) cGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTa < 4:115684/149‑1 (MQ=255) tCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGAtt < 3:149268/149‑1 (MQ=255) cACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTgccagc < 8:178534/149‑1 (MQ=255) aCCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTGGATGGTGATCTGGt < 4:307435/122‑1 (MQ=255) aCCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTGGATGGTGATCTGGt > 3:307435/1‑122 (MQ=255) ccAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTgccagc > 2:316081/1‑147 (MQ=255) cAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACTGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGccagccag < 2:175820/149‑1 (MQ=255) aTGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTgccagc > 6:184318/1‑144 (MQ=255) gctgctGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTg < 5:184318/149‑1 (MQ=255) gctgctGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTg > 3:87336/1‑149 (MQ=255) tgcAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGt > 6:70228/1‑149 (MQ=255) cAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTcg > 2:226427/1‑149 (MQ=255) aaTCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTcgc > 4:197857/1‑149 (MQ=255) aTCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTcgcg > 8:218872/1‑149 (MQ=255) ccggcctcggcgccttggctgacggctgccgacgcccaggacatcgagcgccgcctggccgcagagcaggccgccgcaccgcagcagagcaagCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCt < 7:81500‑M1/56‑1 (MQ=255) ccGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGc < 8:31056/149‑1 (MQ=255) cGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGcc < 7:165592/131‑1 (MQ=255) cGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGcc > 8:165592/1‑131 (MQ=255) cGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGcc > 2:85990/1‑149 (MQ=255) cgccttggctgacggctgccgacgcccaggacatcgagcgccgcctggccgcagagcaggccgccgcaccgcagcagagcaagCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCtt > 8:81500‑M1/84‑149 (MQ=255) agcagGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCtt > 5:62464/1‑149 (MQ=255) agcagGACGACCTGGAAGGGCGAAAGCGCAGCGTACCTGCCGATAATGCCCGGCCGGAAGAAAATCACCGGGTAGATCGTGATCTGGTGCACGAAGTAGACCGCGATAGCAAGACAGATCTGCCGGTCGCGAAACATCTGCCCCAGAtt > 1:257915/1‑149 (MQ=255) gcagGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTg > 6:209786/1‑149 (MQ=255) gCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGACGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTgcggcg > 1:81798/1‑149 (MQ=255) gacgcccaggacatcgagcgccgcctggccgcagagcaggccgccgcaccgcagcagagcaagCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCt < 8:262031‑M1/65‑1 (MQ=255) gacgcccaggacatcgagcgccgcctggccgcagagcaggccgccgcaccgcagcagagcaagCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCt > 7:262031‑M1/64‑128 (MQ=255) gAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCggcggc > 1:142740/1‑149 (MQ=255) aGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTg > 6:48734/1‑149 (MQ=255) cGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCg < 2:174853/149‑1 (MQ=255) tAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGc < 1:316081/149‑1 (MQ=255) aGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGc > 6:144592/1‑148 (MQ=255) ccGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAggcg < 5:48734/149‑1 (MQ=255) tAATGCCCGGCAGGTAGAAAATCACCGTGTAGAGTGTGATCTGGTGCAGGAATTAGACCGCGATTGCCAGCCAGATCTGCGGGGCGCTTAACTTCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAggcggc < 2:257915/147‑1 (MQ=255) tAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGgcgc < 5:144592/149‑1 (MQ=255) aTGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTc < 1:226427/149‑1 (MQ=255) tGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCg < 1:12919/149‑1 (MQ=255) aGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCTATGTCCTg < 7:218872/149‑1 (MQ=255) gaagaaAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTggg < 3:197857/149‑1 (MQ=255) agaaAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCg > 4:122809/1‑149 (MQ=255) aaTCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTCCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCgg < 6:62464/149‑1 (MQ=255) ccGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGcc < 2:142740/149‑1 (MQ=255) ccGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGcc < 5:70228/149‑1 (MQ=255) ccGTGTAGATGGTGATCTGGTGCACGAAGTAGACAGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTATCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTTGGCGTCGGCAGcc > 1:309529/1‑149 (MQ=255) tgtAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGt > 1:316547/1‑148 (MQ=255) aTGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGAAGCCGTCAGcc > 8:112895/1‑148 (MQ=255) ggTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCa > 7:69436/1‑136 (MQ=255) ggTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCa < 8:69436/136‑1 (MQ=255) gTGATCTTGTGCACGTAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGTCAGCCAAg < 7:128398/148‑1 (MQ=255) gTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGTCAGCCAAgg > 3:149540/1‑149 (MQ=255) tGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGTCAGCCAAGgc < 2:270029/149‑1 (MQ=255) | GAGGTGGCCAGGCGTGGCAAGGTCGCTGCACCAATGGCTGCTGCAATCCACGGCACCGCTGTCAGCAGGCCGACCTGGAAGGGCGAAAGCGCAGCGTAGGTGCCGATAATGCCCGGCAGGAAGAAAATCACCGTGTAGATGGTGATCTGGTGCACGAAGTAGACCGCGATTGCCAGCCAGATCTGCCGGTCGCGGAACATCTGCCCCAGCTTGCTCTGCTGCGGTGCGGCGGCCTGCTCTGCGGCCAGGCGGCGCTCGATGTCCTGGGCGTCGGCAGCCGTCAGCCAAGGC > NC_002947/3230397‑3230687 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |