New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4933522 =	79 (1.470)	4 (0.080)	4/246	NT	5.9%	coding (927/1308 nt)	flhF	flagellar biosynthesis protein FlhF
	?	NC_002947	4933601 =	54 (1.080)					coding (848/1308 nt)	flhF	flagellar biosynthesis protein FlhF

TCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGC  >  NC_002947/4933374‑4933668                                                                                                                                                     |                                                                                                                                                   tCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAggg                                                                                                                                                    >  1:82843/1‑149 (MQ=255) tCAGGATGAAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAggg                                                                                                                                                    >  6:119984/1‑149 (MQ=255)   aagctggccgcgcgctacgtgctcaagtacggcgcgcagaacctggcgctggtgagcatggacagcttccgtatcggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTc                                                                                                                                                  >  7:236503‑M1/147‑149 (MQ=255)       tGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTg                                                                                                                                              <  5:256291/149‑1 (MQ=255)         cAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTgg                                                                                                                                             <  4:261810/148‑1 (MQ=255)          aGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCt                                                                                                                                           >  4:304735/1‑149 (MQ=255)           gCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCtt                                                                                                                                          <  4:264967/149‑1 (MQ=255)              ggccaggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGGAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCa                                                                                                                                       <  1:105936/149‑1 (MQ=255)               gccaggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAg                                                                                                                                      <  5:119984/149‑1 (MQ=255)                 caggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGc                                                                                                                                    <  2:144614/149‑1 (MQ=255)                  aggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGcc                                                                                                                                   <  2:95678/149‑1 (MQ=255)                   ggccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCg                                                                                                                                  >  1:335033/1‑149 (MQ=255)                    gccaCAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCgg                                                                                                                                 >  1:273874/1‑149 (MQ=255)                       acaGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAg                                                                                                                              >  3:76744/1‑149 (MQ=255)                             cTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGa                                                                                                                        <  2:101907/149‑1 (MQ=255)                               tGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTACAGGCCGGCAGTATCGAt                                                                                                                       >  1:6476/1‑148 (MQ=255)                                gTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCGAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCCCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATc                                                                                                                      <  2:208893/148‑1 (MQ=255)                                gTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGAt                                                                                                                       >  7:12509/1‑147 (MQ=255)                                gTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGAt                                                                                                                       <  3:159450/147‑1 (MQ=255)                                gTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGAt                                                                                                                       >  3:314180/1‑147 (MQ=255)                                   gCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGca                                                                                                                  <  4:76744/149‑1 (MQ=255)                                    cTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGcac                                                                                                                 <  2:190778/149‑1 (MQ=255)                                     tgtgGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGcac                                                                                                                 >  2:229470/1‑148 (MQ=255)                                       tgGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCa                                                                                                                               >  6:192031/1‑132 (MQ=255)                                       tgGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCa                                                                                                                               <  5:192031/132‑1 (MQ=255)                                         gTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCAcgc                                                                                                            >  7:143565/1‑149 (MQ=255)                                               ggcggTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTAt                                                                                                                           <  1:155880/128‑1 (MQ=255)                                               ggcggTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTAt                                                                                                                           >  2:155880/1‑128 (MQ=255)                                               ggcggTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTgc                                                                                                      <  1:212458/149‑1 (MQ=255)                                                   gTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATc                                                                                                                      >  4:16736/1‑129 (MQ=255)                                                   gTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATc                                                                                                                      <  3:16736/129‑1 (MQ=255)                                                    tCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCgcagc                                                                                                 <  3:135884/149‑1 (MQ=255)                                                        gagcatggacagcttccgtatcggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTg                                                                                             <  6:84484‑M1/56‑1 (MQ=255)                                                        cACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTg                                                                                             <  5:50400/149‑1 (MQ=255)                                                           cTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGtt                                                                                          >  5:319259/1‑149 (MQ=255)                                                                 ctggctggTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAgcg                                                                                    >  6:57333/1‑149 (MQ=255)                                                                   gcttccgtatcggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑AGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGAc                                                                      >  2:24485‑M1/83‑149 (MQ=255)                                                                     ctggTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCgctgc                                                                                <  4:31452/149‑1 (MQ=255)                                                                        gtggtggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCgctgct                                                                               <  3:304735/147‑1 (MQ=255)                                                                        gtggtggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGAGCtgctgc                                                                             <  6:275319/149‑1 (MQ=255)                                                                         tggtggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCtgctgc                                                                             >  8:145427/1‑148 (MQ=255)                                                                           gtggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAg                                                                          >  5:132392/1‑149 (MQ=255)                                                                            tggCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGc                                                                         >  4:317614/1‑149 (MQ=255)                                                                            tcggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGc                                                                         >  3:163674‑M1/74‑149 (MQ=255)                                                                              ggcgctcaggaacagctcaagaccctgggccgcatcctcaacgtgccggtgacttacgtcgacccgggccaGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGa                                                                       >  5:84484‑M1/72‑149 (MQ=255)                                                                              gCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGa                                                                       <  7:260855/149‑1 (MQ=255)                                                                                   cACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCtgctgc                                                                             >  4:199511/1‑138 (MQ=255)                                                                                   cACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCtgctgc                                                                             <  3:199511/138‑1 (MQ=255)                                                                                   cACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGc                                                                  >  7:118211/1‑149 (MQ=255)                                                                                        ggTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCggg                                                             <  2:82843/149‑1 (MQ=255)                                                                                        ggTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCggg                                                             <  1:92587/149‑1 (MQ=255)                                                                                                ttcGCGGCAATGCCATGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGt                                                      >  3:317242/1‑148 (MQ=255)                                                                                                ttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGt                                                      >  7:167470/1‑148 (MQ=255)                                                                                                ttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGt                                                      >  4:230468/1‑148 (MQ=255)                                                                                                ttcGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGt                                                      >  2:39904/1‑148 (MQ=255)                                                                                                  cgcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTaa                                                    <  3:317614/148‑1 (MQ=255)                                                                                                  cgcgGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTa                                                     <  6:132392/147‑1 (MQ=255)                                                                                                     ggCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCa                                                >  2:33073/1‑149 (MQ=255)                                                                                                      gCAATGCCATGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCAc                                               <  4:317242/149‑1 (MQ=255)                                                                                                      gCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCAc                                               <  2:335033/149‑1 (MQ=255)                                                                                                      gCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCAc                                               <  1:229470/149‑1 (MQ=255)                                                                                                       cAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAg                                                   >  7:295332/1‑144 (MQ=255)                                                                                                       cAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAg                                                   <  8:295332/144‑1 (MQ=255)                                                                                                        aaTGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCg                                             >  3:280982/1‑149 (MQ=255)                                                                                                             cACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGt                                                                                              <  6:91859/95‑1 (MQ=255)                                                                                                             cACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACg                                        >  1:150415/1‑149 (MQ=255)                                                                                                                gCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACg                                        >  4:277610/1‑146 (MQ=255)                                                                                                                gCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTg                                     >  6:143453/1‑149 (MQ=255)                                                                                                                gCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGATTGCAGGCCGGCAGTATCGATCACCACCACGCGCTTGCGAAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGtt                                      >  8:274184/1‑148 (MQ=255)                                                                                                                 cccGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGa                                    <  5:85048/149‑1 (MQ=255)                                                                                                                  ccGGCCAAGGTTTCCAGTTGGATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAg                                   <  2:273874/149‑1 (MQ=255)                                                                                                                      ccAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATg                               >  6:58116/1‑149 (MQ=255)                                                                                                                        aaGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCg                             <  8:143565/149‑1 (MQ=255)                                                                                                                         aGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCgg                            <  4:280982/149‑1 (MQ=255)                                                                                                                            tttCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGcc                          >  1:279195/1‑148 (MQ=255)                                                                                                                              tCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAgcg                                                                                    <  4:308808/88‑1 (MQ=255)                                                                                                                              tCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAgcg                                                                                    >  3:308808/1‑88 (MQ=255)                                                                                                                               ccAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAgg                      >  3:166867/1‑149 (MQ=255)                                                                                                                                 aGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGt                    <  4:314180/149‑1 (MQ=255)                                                                                                                                       aTGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAg              >  5:24247/1‑149 (MQ=255)                                                                                                                                             aGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTc        <  3:230468/149‑1 (MQ=255)                                                                                                                                             aGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTc        <  7:145427/149‑1 (MQ=255)                                                                                                                                             aGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTc        <  1:33073/149‑1 (MQ=255)                                                                                                                                             aGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTc        >  1:24782/1‑149 (MQ=255)                                                                                                                                               tGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCt      >  7:118448/1‑149 (MQ=255)                                                                                                                                               tGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCt      <  8:167470/149‑1 (MQ=255)                                                                                                                                                 cAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTg     <  3:98641/148‑1 (MQ=255)                                                                                                                                                 cAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGa    <  6:293711/149‑1 (MQ=255)                                                                                                                                                 cAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGa    <  5:58116/149‑1 (MQ=255)                                                                                                                                                   gggTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAgc  <  8:12509/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGTAGGCGGCGGTCAGCACCTGCTTCTGGCTGGTGGTGGCCAGCACCAGGTAGTTCTTCGCGGCAATGCCACGCCCGGCCAAGGTTTCCAGTTGCATGCGCAGTGCAGGGTCGCTGGCTTGCAGGCCGGCAGTATCGATCAGCACCACGCGCTTGCGCAGCAGTGGTTCCAGCGCTGCTGCCAGCGACTGGCCCGGGTCGACGTAAGTCACCGGCACGTTGAGGATGCGGCCCAGGGTCTTGAGCTGTTCCTGAGC  >  NC_002947/4933374‑4933668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.