New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6164712	47 (0.870)	5 (0.100)	3/254	NT	8.6%	coding (571/2013 nt)	PP_5405	transposase
	?	NC_002947	= 6164746	61 (1.180)					coding (537/2013 nt)	PP_5405	transposase

TGCATTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGTTCTGATGGG  >  NC_002947/6164566‑6164858                                                                                                                                                   |                                                                                                                                                   tGCATTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAgg                                                                                                                                                  >  1:339267/1‑149 (MQ=255)  gCATTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAggg                                                                                                                                                 >  2:4273/1‑149 (MQ=255)    aTTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGcc                                                                                                                                               >  2:39073/1‑149 (MQ=255)    aTTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGA                                                                                                                                                    >  5:127228‑M1/1‑144 (MQ=255)    aTTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGA                                                                                                                                                    <  6:127228‑M1/144‑1 (MQ=255)     ttGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGcc                                                                                                                                               >  3:74122/1‑148 (MQ=255)          gCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCaa                                                                                                                                         <  1:320122/149‑1 (MQ=255)          gCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCaa                                                                                                                                         <  2:306869/149‑1 (MQ=255)                   tcCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGt                                                                                                                                  <  2:339267/147‑1 (MQ=255)                        tAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGc                                                                                                                           >  2:196955/1‑149 (MQ=255)                        tAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGc                                                                                                                           >  8:147079/1‑149 (MQ=255)                                      tAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtct                                                                                                               >  4:224408‑M2/1‑144 (MQ=255)                                        gATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCCTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGAt                                                                                                           >  2:318360/1‑149 (MQ=255)                                            ttattaTGAGTCATGTGGGGGGATTTATTGGCGAGGCACCCCTGTAGCACCCTCTGCTGCATTTCTGCTTCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCa                                                                                                       >  6:145433/1‑149 (MQ=255)                                            atATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCa                                                                                                       >  4:247662/2‑149 (MQ=255)                                              aTTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAagggccagggcgtatgacgaagcttggtcggccctctcgcaag                                                                                                         <  5:339946‑M1/145‑44 (MQ=255)                                              aTTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCAt                                                                                                      <  1:196955/148‑1 (MQ=255)                                              aTTTTGAGTCTTCTGGCGGGATTTATTCGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGCTAACCATGCCTTTTTCCCTTGCGAGAGGCCCGACCCAGCTTCGACATACGCCCTCGCCCTTCTCGATTCCaag                                                                                                     >  6:250732/1‑147 (MQ=255)                                               ttttGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGc                                                                                                    <  5:16408/149‑1 (MQ=255)                                                      tCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATa                                                                                             >  5:104334/1‑149 (MQ=255)                                                           tgGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTg                                                                                        <  1:186258/149‑1 (MQ=255)                                                            ggggggATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAagggccagggcgtatgacgaagcttggtcggccctctcgcaagg                                                                                                        <  7:66925‑M1/132‑45 (MQ=255)                                                            ggggggATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAagggccagggcgtatgacgaagcttggtcggccctctcgcaagg                                                                                                        >  8:62303‑M1/1‑88 (MQ=255)                                                            ggggggATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAagggccagggcgtatgacgaagcttggtcggccctctcgcaagg                                                                                                        <  7:62303‑M1/132‑45 (MQ=255)                                                            ggggggATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAagggccagggcgtatgacgaagcttggtcggccctctcgcaagg                                                                                                        >  8:66925‑M1/1‑88 (MQ=255)                                                               ggaaTTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGaa                                                                                      >  2:15370/4‑147 (MQ=255)                                                                   tttATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACg                                                                                                                            >  1:78807/1‑105 (MQ=255)                                                                   tttATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACg                                                                                                                            <  2:78807/105‑1 (MQ=255)                                                                    ttATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTgg                                                                               >  4:277554/1‑149 (MQ=255)                                                                           cGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAg                                                                        <  4:154540/149‑1 (MQ=255)                                                                               gAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAg                                                                        <  4:41704/145‑1 (MQ=255)                                                                               gAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAg                                                                        >  3:41704/1‑145 (MQ=255)                                                                               gAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGAc                                                                     >  4:116141/1‑148 (MQ=255)                                                                                    ccTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACt                                                                 >  5:255812/1‑147 (MQ=255)                                                                                    ccTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTa                                                               <  7:147079/149‑1 (MQ=255)                                                                                     cTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAg                                                              <  1:4273/149‑1 (MQ=255)                                                                                        tAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTc                                                            <  1:39073/148‑1 (MQ=255)                                                                                              ccTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCa                                                      >  6:188478/1‑148 (MQ=255)                                                                                               ctctGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCaaa                                                    >  8:149575/1‑149 (MQ=255)                                                                                                  tgctgcATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAacac                                                 >  5:170293/1‑149 (MQ=255)                                                                                                    ctgcATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGACGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAaca                                                  <  5:145433/146‑1 (MQ=255)                                                                                                    ctgcATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCa                                               <  3:277554/149‑1 (MQ=255)                                                                                                         tttCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAg                                          <  5:188478/149‑1 (MQ=255)                                                                                                           tCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAgg                                         <  6:104334/148‑1 (MQ=255)                                                                                                            cTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACt                                                                 <  1:276867/123‑1 (MQ=255)                                                                                                            cTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACt                                                                 >  2:276867/1‑123 (MQ=255)                                                                                                            cTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGa                                        <  3:247662/148‑1 (MQ=255)                                                                                                               cATCGCAACGATAACCATGCCCTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAg                                       <  1:318360/146‑1 (MQ=255)                                                                                                                         aTAACCATGCCTTTTTCCCTTGCGAGAGTGCAGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGcc                          <  5:247506/149‑1 (MQ=255)                                                                                                                             ccATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGt                      >  2:148625/1‑149 (MQ=255)                                                                                                                             ccATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGt                      >  8:252792/1‑149 (MQ=255)                                                                                                                             ccATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGt                      >  1:273082/1‑149 (MQ=255)                                                                                                                              cATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTc                     >  7:267383/1‑149 (MQ=255)                                                                                                                              cATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTc                     >  8:207323/1‑149 (MQ=255)                                                                                                                               aTGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTcc                    >  3:95899/1‑149 (MQ=255)                                                                                                                                     ttttCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGt                                      <  8:152267/125‑1 (MQ=255)                                                                                                                                     ttttCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGt                                      >  7:152267/1‑125 (MQ=255)                                                                                                                                        tCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGt           >  8:225967/1‑149 (MQ=255)                                                                                                                                          ccTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatcccccc                          >  8:62303‑M2/1‑44 (MQ=255)                                                                                                                                          ccTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatcccccc                          >  8:66925‑M2/1‑44 (MQ=255)                                                                                                                                          ccTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatcccccc                          <  7:66925‑M2/132‑89 (MQ=255)                                                                                                                                          ccTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatcccccc                          <  7:62303‑M2/132‑89 (MQ=255)                                                                                                                                          ccTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGTTc         >  2:132696/1‑149 (MQ=255)                                                                                                                                           cTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTtctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatccccccacaagactcaaaat            <  5:339946‑M2/145‑103 (MQ=255)                                                                                                                                                gagaGGGCCGACCAAGGTTCGTCATAGGCACTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGTTCTGATgg   <  5:250732/149‑1 (MQ=255)                                                                                                                                                 agagGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGTTCTGATggg  <  6:255812/149‑1 (MQ=255)                                                                                                                                                 agaagggccagggcgtatgacgaagcttggtcggccctctcgcaagggaaaaaggcatggttatcgttgcgatgcagaaatgcagcagaggttgctaaaggggttcctcgccaataaatccccccacaagactcaaaataagatcta    >  4:224408‑M1/1‑3 (MQ=255)                                                                                                                                                   |                                                                                                                                                   TGCATTGCAGCCAAACTCTCCTGTAAGGATGTCGCTGTAGATCTTATTTTGAGTCTTGTGGGGGGATTTATTGGCGAGGAACCCCTTTAGCAACCTCTGCTGCATTTCTGCATCGCAACGATAACCATGCCTTTTTCCCTTGCGAGAGGGCCGACCAAGCTTCGTCATACGCCCTGGCCCTTCTCGATTCCATGCCCCAATACGGTGAAGAGGTGGCAGCAAGGACCACTTAGTCCGACCAAACACCATGTAGGAGTAGAACCAGAGCCTTGTCCTGGCTGCGTTCTGATGGG  >  NC_002947/6164566‑6164858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.