New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2059591	41 (0.760)	3 (0.060)	3/246	NT	6.7%	intergenic (+25/+99)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter
	?	NC_002947	= 2059654	45 (0.900)					intergenic (+88/+36)	PP_1835/PP_1836	hypothetical protein/ZIP family metal transporter

GGGCATCAAGGTCGAGCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTC  >  NC_002947/2059512‑2059794                                                                                                                                               |                                                                                                                                             gggCATCAAGGTCGAGCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCCGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAgcccgc                                                                                                                                        >  3:249551‑M2/1‑143 (MQ=255)      tCAAGGTCGAGCCGGCGCTGGAGGCTTTGAAAGGCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAaga                                                                                                                                   <  7:134288/149‑1 (MQ=255)                gCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCgg                                                                                                                             <  8:20238/145‑1 (MQ=255)                gCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCgg                                                                                                                             >  7:20238/1‑145 (MQ=255)                gCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCa                                                                                                                         >  6:50337/1‑149 (MQ=255)                    gcgcTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGaa                                                                                                                     <  5:50337/149‑1 (MQ=255)                     cgcTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGaaa                                                                                                                    <  3:226494/149‑1 (MQ=255)                      gcTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAAc                                                                                                                   <  7:11274/149‑1 (MQ=255)                               tttGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCtt                                                                                                          >  1:82732/1‑149 (MQ=255)                                   aaaGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGcc                                                                                                                               <  8:256024/124‑1 (MQ=255)                                   aaaGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGcc                                                                                                                               >  7:256024/1‑124 (MQ=255)                                       tCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCt                                                                                                                           <  1:128100/124‑1 (MQ=255)                                       tCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCt                                                                                                                           >  2:128100/1‑124 (MQ=255)                                                  aTCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCga                                                                                       <  8:55079/149‑1 (MQ=255)                                                      gATACCAGTGATTACTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGaaa                                                                                   >  2:263118/1‑149 (MQ=255)                                                       cacccAGTGCTTGCTTGTTCGGGGGCATGCCCGCTCCCTCAGGTACGCCAGCGCATCCGGCCCTGGTATAACCCTGGGGGAGCGGGCGAGCCCGCGAATAGGCCGGCTAACGAAACATCAATCTTCCGCCCAGCGCAGTGTCGAGAAAc                                                                                  <  7:51411/146‑1 (MQ=255)                                                        tACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAgtg                                                                                           >  2:34734/1‑139 (MQ=255)                                                        tACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAgtg                                                                                           <  1:34734/139‑1 (MQ=255)                                                           cAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcatca                                                                              >  2:53441/1‑149 (MQ=255)                                                             gTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCa                                                                                                        >  1:1969/1‑121 (MQ=255)                                                             gTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCa                                                                                                        <  2:1969/121‑1 (MQ=255)                                                                     ttGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACAtcatca                                                                           <  3:290844/142‑1 (MQ=255)                                                                     ttGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACAtcatca                                                                           >  4:290844/1‑142 (MQ=255)                                                                            cgGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAgcccgcgaacaagcaatcactggtatcagatgtggacggcgactttcaaagcctccagcgccggctcgaccttgatgcc                                                               <  8:138551‑M2/147‑80 (MQ=255)                                                                             gggCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAgcccgcgaacaagcaatcactggtatcagatgtggacggcgactttcaaagcctccagcgccggctcgaccttgatgcccag                                                            <  1:125833‑M2/149‑83 (MQ=255)                                                                                   gCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAca                                                                                 <  5:329670/122‑1 (MQ=255)                                                                                   gCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAca                                                                                 >  6:329670/1‑122 (MQ=255)                                                                                   gCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACACTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAAcc                                                      >  2:322819/1‑149 (MQ=255)                                                                                    cccGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAAcc                                                      <  8:105746/148‑1 (MQ=255)                                                                                        cTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAgg                                                 <  1:322819/149‑1 (MQ=255)                                                                                            cTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAgcccgcgaacaagcaatcactggtatcagatgtggacggcgactttcaaagcctccagcgccggctcgaccttgatgcccagctctgctcccaactc                                             >  2:125833‑M2/1‑52 (MQ=255)                                                                                             tCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTc                                                                                         <  6:189769/104‑1 (MQ=255)                                                                                             tCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTcgc                                            >  2:179002/1‑149 (MQ=255)                                                                                                 gTAGTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGATGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCt                                        <  2:270980/149‑1 (MQ=255)                                                                                                 gTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGcc                                                                                                     <  5:316400/88‑1 (MQ=255)                                                                                                 gTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGcc                                                                                                     >  6:316400/1‑88 (MQ=255)                                                                                                 gTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCgaga                                                                                     >  2:63946/1‑104 (MQ=255)                                                                                                 gTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCgaga                                                                                     <  1:63946/104‑1 (MQ=255)                                                                                                     tCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAc                                                                                  >  6:281722/1‑103 (MQ=255)                                                                                                     tCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAc                                                                                  <  5:281722/103‑1 (MQ=255)                                                                                                     tCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCt                                    >  4:64714/1‑149 (MQ=255)                                                                                                             aTCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCg                            <  2:82732/149‑1 (MQ=255)                                                                                                               cAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCATGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGtt                          >  2:70817/1‑149 (MQ=255)                                                                                                                      tgtgATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACAAAACATCAATATTCAGACCAGCGCATTGTCGAGAAACATCAACACCGCAAAACCGACCATCAAACCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTgg                   >  6:253120/1‑149 (MQ=255)                                                                                                                         gATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcatca                                                                              >  6:124017/1‑87 (MQ=255)                                                                                                                         gATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAAcatca                                                                              <  5:124017/87‑1 (MQ=255)                                                                                                                          aTAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGttt               >  7:11841/1‑149 (MQ=255)                                                                                                                             aCCCTGTGGGAGGGGTCGTGACCGCTAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCTATCCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCg             <  5:253120/148‑1 (MQ=255)                                                                                                                             aCCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCgg            >  5:162914/1‑149 (MQ=255)                                                                                                                                       aGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAGCATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTc  >  6:149050/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                             GGGCATCAAGGTCGAGCCGGCGCTGGAGGCTTTGAAAGTCGCCGTCCACATCTGATACCAGTGATTGCTTGTTCGCGGGCATGCCCGCTCCCTCAGGTACTCCAGCGCATCAGGCCCTGTGATAACCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCTCACGAAACATCAATCTTCAGCCCAGCGCAGTGTCGAGAAACATCATCACCGCAAACCCGCCCATCAACCCCAGGGTCGCCGCTGTCTGGTGCCCGTTGCGGTGGGTTTCGGGGATCACCTC  >  NC_002947/2059512‑2059794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.