New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2684111 =	33 (0.610)	3 (0.060)	3/254	NT	7.3%	coding (454/1128 nt)	PP_2352	hypothetical protein
	?	NC_002947	2684194 =	44 (0.850)					coding (371/1128 nt)	PP_2352	hypothetical protein

TTGAACAGCCGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCTTGTTCAAGCTGCGT  >  NC_002947/2684047‑2684339                                                                                                                                                    |                                                                                                                                                  ttGAACAGCCGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAg                                                                                                                                                  >  2:43324/1‑149 (MQ=255)   ttccaggccgtgccgatagccgccaagctgcgcctgcattttcatgatttctttgcacgcctGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAgg                                                                                                                                                 >  8:296287‑M1/63‑148 (MQ=255)    aaCAGCCGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCg                                                                                                                                               >  1:173484/1‑149 (MQ=255)     aCAGCCGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGt                                                                                                                                              <  8:241186/149‑1 (MQ=255)          cGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCaaa                                                                                                                                         <  8:295031/149‑1 (MQ=255)                agcagcATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAAt                                                                                                                                    <  1:298973/148‑1 (MQ=255)                      aTGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGaa                                                                                                                              >  1:73680/1‑148 (MQ=255)                            tCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAg                                                                                                                       <  8:29699/149‑1 (MQ=255)                            tCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAg                                                                                                                       >  7:152679/1‑149 (MQ=255)                                 tATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGaa                                                                                                                              <  5:276433/137‑1 (MQ=255)                                 tATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGaa                                                                                                                              >  6:276433/1‑137 (MQ=255)                                  aTGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAg                                                                                                                 >  3:209982/1‑149 (MQ=255)                                     tCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCATCCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGaaa                                                                                                                             <  1:278785/134‑1 (MQ=255)                                     tCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGaaa                                                                                                                             >  2:278785/1‑134 (MQ=255)                                          cACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTggcgg                                                                                                         <  2:173484/149‑1 (MQ=255)                                             gTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTa                                                                                                      >  6:40876/1‑149 (MQ=255)                                              tGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTAt                                                                                                     <  1:55037/149‑1 (MQ=255)                                              tGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACAAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTAt                                                                                                     >  8:62071/1‑149 (MQ=255)                                                  aTTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCgg                                                                                                  >  5:326294/1‑148 (MQ=255)                                                             cacagcacCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGa                                                                                       >  3:179395/1‑148 (MQ=255)                                                              cctgcaccagggcatgcaccgccaccgggcgctggacgacgcgctgggcgcaacgctggacgagctggtgggtggttgccgggtgcAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGaa                                                                                      >  8:296287‑M2/87‑148 (MQ=255)                                                              acagcacCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTggcgg                                                                                                         >  5:12651/1‑129 (MQ=255)                                                              acagcacCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTggcgg                                                                                                         <  6:12651/129‑1 (MQ=255)                                                              acagcacCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGaa                                                                                      >  5:86201/1‑148 (MQ=255)                                                                agcacCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGaaa                                                                                     >  4:35063/1‑147 (MQ=255)                                                                  caccagggcatgcaccgccaccgggcgctggacgacgcgctgggcgcaacgctggacgagctggtgggtggttgccgggtgcAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACg                                                                                              <  7:181414‑M2/54‑1 (MQ=255)                                                                  caccagggcatgcaccgccaccgggcgctggacgacgcgctgggcgcaacgctggacgagctggtgggtggttgccgggtgcAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACg                                                                                              >  8:181414‑M2/83‑136 (MQ=255)                                                                     CCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCAt                                                                              <  6:182280‑M1/149‑1 (MQ=255)                                                                      cGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATc                                                                             <  5:40876/149‑1 (MQ=255)                                                                           accaccCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGagca                                                                        <  5:182280/149‑1 (MQ=255)                                                                             cacccaccAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGagcagc                                                                      >  3:52792/1‑149 (MQ=255)                                                                             cacccaccAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGagcagc                                                                      >  4:291401/1‑149 (MQ=255)                                                                                ccaccaGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGcagccag                                                                   <  7:62071/149‑1 (MQ=255)                                                                                  accaGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGCCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCt                                                                 >  7:155874/1‑149 (MQ=255)                                                                                       cTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTAc                                                            <  5:121556/149‑1 (MQ=255)                                                                                       cTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTAc                                                            >  3:185501/1‑149 (MQ=255)                                                                                            ccAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCgg                                                       >  7:252905/1‑149 (MQ=255)                                                                                                      gcCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAACAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGc                                             >  4:8595/1‑149 (MQ=255)                                                                                                                  gtcCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCgtacaggtac                                  <  8:152679/148‑1 (MQ=255)                                                                                                                     cAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGa                               <  6:11438/148‑1 (MQ=255)                                                                                                                     cAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGa                               <  3:291401/148‑1 (MQ=255)                                                                                                                     cAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGa                               <  1:43324/148‑1 (MQ=255)                                                                                                                         gcCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTgcg                          <  3:35063/149‑1 (MQ=255)                                                                                                                          cccGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTgcgc                         >  1:149228/1‑149 (MQ=255)                                                                                                                           ccGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGcgcg                        <  4:179395/149‑1 (MQ=255)                                                                                                                            cGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCACGGCCGACCGAGCCGTACAGGTACAGACTGCGCgg                       >  6:278442/1‑149 (MQ=255)                                                                                                                                ggCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGa                   <  4:185501/149‑1 (MQ=255)                                                                                                                                 gCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGa                   <  6:326294/148‑1 (MQ=255)                                                                                                                                 gCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGa                   <  2:73680/148‑1 (MQ=255)                                                                                                                                   ggTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCt                >  2:232230/1‑149 (MQ=255)                                                                                                                                        aTGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCTTGta            >  6:245343/1‑147 (MQ=255)                                                                                                                                              tGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCTTGTTCAAGCTg     >  8:32561/1‑149 (MQ=255)                                                                                                                                                  gcAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCTTGTTCAAGCTGCGt  >  2:89611‑M2/3‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TTGAACAGCCGGGTGAGCAGCATGGCATCGCCTATGTCATGCACGTGGAATTCGTCGAAGCACAGCACCCGGCAACCACCCACCAGCTCGTCCAGCGTTGCGCCCAGCGCGTCGTCCAGCGCCCGGTGGCGGTGCATGCCCTGGTGCAGGCGTGCAAAGAAATCATGAAAATGCAGGCGCAGCTTGGCGGCTATCGGCACGGCCTGGAAAAAGCCATCGAGCAGCCAGCTTTTACCCCGGCCGACCGAGCCGTACAGGTACAGACTGCGCGGTTGACCTTGTTCAAGCTGCGT  >  NC_002947/2684047‑2684339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.