New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2828149 =	36 (0.670)	3 (0.060)	3/258	NT	7.8%	coding (325/1209 nt)	PP_2480	xanthine dehydrogenase accessory factor
	?	NC_002947	2828206 =	36 (0.680)					coding (382/1209 nt)	PP_2480	xanthine dehydrogenase accessory factor

CTACAGCACCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGACCTGCAG  >  NC_002947/2828058‑2828352                                                                                                                                                     |                                                                                                                                                   cctcctgcccaggcatcaagcacaaacgctcgcctaagcgtggcgcagccgcgcccgagctgacgattaccgtggcgatggccgcaggctgCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagc                                                                                                                                                    >  4:315595‑M1/92‑149 (MQ=255)    cAGCACCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagca                                                                                                                                                   <  8:155176/147‑1 (MQ=255)    cAGCACCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagca                                                                                                                                                   <  6:63098/147‑1 (MQ=255)     ctgcccaggcatcaagcacaaacgctcgcctaagcgtggcgcagccgcgcccgagctgacgattaccgtggcgatggccgcaggctgCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagcag                                                                                                                                                  >  2:315698‑M1/88‑147 (MQ=255)     aGCACCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGcc                                                                                                                                                >  5:138958/1‑149 (MQ=255)        aCCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagc                                                                                                                                                    <  3:236959/142‑1 (MQ=255)        aCCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCcagc                                                                                                                                                    >  4:236959/1‑142 (MQ=255)          cGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCgg                                                                                                                                           <  6:105112/149‑1 (MQ=255)             agagGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCa                                                                                                                                        >  8:196348/1‑149 (MQ=255)                      tGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACgg                                                                                                                               <  7:204556/149‑1 (MQ=255)                          gCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAAt                                                                                                                           <  7:164607/149‑1 (MQ=255)                              gCGAGGAAGCCCTGAGCGTCGGCCTGGGCGGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTc                                                                                                                       <  8:129679/149‑1 (MQ=255)                                        ccTGAGCTTCGGCCTCGGCTGTAACGGCAACGTTCACCTGCTGTTCGAGCGCCTGCCCGCCCGCCCTTGCGCCTTGGTCGATGCATTGCTCAGCGTGCGAGACCGCCAGCAGCCTGCTGCCATCCCCACGGTAATCGTCAGCTCGGgcg                                                                                                             >  6:147967/2‑149 (MQ=255)                                                tCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTgcg                                                                                                     >  7:176707/1‑149 (MQ=255)                                                  ggCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGcc                                                                                                   <  6:138958/149‑1 (MQ=255)                                                        ggCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCTACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGc                                                                                               <  7:259997/147‑1 (MQ=255)                                                           tGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAgg                                                                                          >  6:98978/1‑149 (MQ=255)                                                             tAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGc                                                                                         <  6:134897/148‑1 (MQ=255)                                                                    aaGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGttt                                                                                 >  4:143989/1‑149 (MQ=255)                                                                      ggTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTTCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTtgt                                                                               >  7:50515/1‑149 (MQ=255)                                                                         tCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCt                                                                            >  7:287372/1‑149 (MQ=255)                                                                          cACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCt                                                                            <  7:196348/148‑1 (MQ=255)                                                                                 tGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCt                                                                    >  2:79610/1‑149 (MQ=255)                                                                                  gTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTg                                                                   >  4:41907/1‑149 (MQ=255)                                                                                     cGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTggg                                                                 >  7:30443/1‑148 (MQ=255)                                                                                         ctgctggcggtcgcgcacgctgagcaaagcatcgaccaaggcgcaagggccggccggcagCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCag                                                              >  2:315698‑M2/61‑147 (MQ=255)                                                                                           gctggcggtcgcgcacgctgagcaaagcatcgaccaaggcgcaagggccggccggcagCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCaggagg                                                          >  4:315595‑M2/59‑149 (MQ=255)                                                                                            CTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTgcgc                                                                                                    >  8:208394‑M1/1‑106 (MQ=255)                                                                                             TGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGcc                                                        <  4:269925‑M1/149‑1 (MQ=255)                                                                                                cggccggcCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCcgcg                                                     >  2:196319/1‑149 (MQ=255)                                                                                                 ggccggccCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCgg                                                    <  7:57833/149‑1 (MQ=255)                                                                                                  gtcgcgcacgctgagcaaagcatcgaccaaggcgcaagggccggccggcagCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCggg                                                   <  1:315698‑M2/98‑1 (MQ=255)                                                                                                  gccggccCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCagga                                                            >  8:221269/1‑140 (MQ=255)                                                                                                  gccggccCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCagga                                                            <  7:221269/140‑1 (MQ=255)                                                                                                      gccCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAg                                               <  8:176707/149‑1 (MQ=255)                                                                                                             cgcCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTtgctgc                                        <  1:79610/149‑1 (MQ=255)                                                                                                                       gATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCt                              >  4:14823/1‑149 (MQ=255)                                                                                                                         tGCTTTGCTCAGCGTGCGTGACCGCCAGCAGCCTGCGGCCTTCGCCACGGTAAGCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCTAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGTTGCTgg                            <  5:147967/149‑1 (MQ=255)                                                                                                                           cTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGtt                          <  5:98978/149‑1 (MQ=255)                                                                                                                            tttGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGtt                          >  5:277799/1‑148 (MQ=255)                                                                                                                            tttCCTCAGCGTGCGCGACCGCCACCAGCCAGCGGCCATCGCCACGGTAATCGTCAGCTCGCCCCCGGCTGCGCCACGCTAAGGCGAGCCTTTCTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGCTGCTCGtt                          >  1:198618/1‑148 (MQ=255)                                                                                                                                   aGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAAt                  <  3:269925/149‑1 (MQ=255)                                                                                                                                   aGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAAt                  >  2:110969/1‑149 (MQ=255)                                                                                                                                   aGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAAt                  >  8:24381/1‑149 (MQ=255)                                                                                                                                          gcgACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGcc           >  5:189506/1‑149 (MQ=255)                                                                                                                                          gcgACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGcc           >  4:295631/1‑149 (MQ=255)                                                                                                                                            gACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGc                                                                      >  8:215368/1‑88 (MQ=255)                                                                                                                                            gACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGa         <  8:287372/149‑1 (MQ=255)                                                                                                                                             aCCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGAc        <  2:192291/149‑1 (MQ=255)                                                                                                                                                 ccAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGACCTgc    <  3:143989/149‑1 (MQ=255)                                                                                                                                                  cagCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCa                >  4:49968‑M2/4‑136 (MQ=255)                                                                                                                                                  cagCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCa                <  3:49968‑M2/133‑1 (MQ=255)                                                                                                                                                   agCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGACCTgcag  <  3:14823‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CTACAGCACCGCAGAGGCGGATGACGCCAGCGAGGAAGCGCTGAGCTTCGGCCTGGGCTGTAACGGCAAGGTTCACGTGCTGTTCGAGCGCCTGCCGGCCGGCCCTTGCGCCTTGGTCGATGCTTTGCTCAGCGTGCGCGACCGCCAGCAGCCTGCGGCCATCGCCACGGTAATCGTCAGCTCGGGCGCGGCTGCGCCACGCTTAGGCGAGCGTTTGTGCTTGATGCCTGGGCAGGAGGCCGCGGGCGAGTTGCTGCGCTCGGTGCTGGTTGAGCAAATCAGCGCCGACCTGCAG  >  NC_002947/2828058‑2828352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.