New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3005550	35 (0.650)	4 (0.080)	3/248	NT	9.9%	coding (2131/3621 nt)	PP_2627	membrane protein
	?	NC_002947	= 3005581	40 (0.790)					coding (2162/3621 nt)	PP_2627	membrane protein

GCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGACGTCGACCGCGATGCGCT  >  NC_002947/3005435‑3005728                                                                                                                                                   |                                                                                                                                                    gCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTac                                                                                                                                                   <  7:268726‑M2/149‑3 (MQ=255)   cGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGCTGATGAGGATGTacgg                                                                                                                                                 <  7:284123‑M2/149‑5 (MQ=255)           caGCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGgccgc                                                                                                                                         >  1:289328/1‑149 (MQ=255)             gCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCa                                                                                                                                       <  2:25659/149‑1 (MQ=255)                    tATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGTCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCAc                                                                                                                                >  3:215521/1‑149 (MQ=255)                            gCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAg                                                                                                                        <  5:277288/149‑1 (MQ=255)                                aaaCAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCtt                                                                                                                    <  3:123957/149‑1 (MQ=255)                                  acaacaATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCa                                                                                                                  <  8:268726/149‑1 (MQ=255)                                    aacaaTCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAgg                                                                                                                >  5:44555/1‑149 (MQ=255)                                    aacaaTCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAgg                                                                                                                >  5:274472/1‑149 (MQ=255)                                              ccAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGTGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGaa                                                                                                             <  8:269480/142‑1 (MQ=255)                                              ccAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATagctcg                                                                                                      >  7:269480/1‑144 (MQ=255)                                               cagcagTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTc                                                                                                       >  3:194755/1‑147 (MQ=255)                                                 gcagTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGc                                                                                                   >  7:259747/1‑149 (MQ=255)                                                  cagTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGcc                                                                                                  <  6:44555/149‑1 (MQ=255)                                                             cGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAAc                                                                                       >  4:303381/1‑149 (MQ=255)                                                                gCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCt                                                                                    >  6:175133/1‑149 (MQ=255)                                                                     aCCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCt                                                                               <  3:288362/149‑1 (MQ=255)                                                                      ccTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCt                                                                               >  1:262052/1‑148 (MQ=255)                                                                            cccccaGGTAGGGCCTGCGTTCGATGGGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCCCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATgg                                                                        <  4:84642/146‑1 (MQ=255)                                                                            ccaccaGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATgg                                                                        <  2:289328/149‑1 (MQ=255)                                                                             caccaGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGc                                                                       <  3:303381/149‑1 (MQ=255)                                                                                  ggTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATgg                                                                  <  2:53031/149‑1 (MQ=255)                                                                                          cTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCg                                                                                                 >  4:166794/1‑110 (MQ=255)                                                                                          cTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCg                                                                                                 <  3:166794/110‑1 (MQ=255)                                                                                                 cGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCAt                                                   >  3:180739/1‑149 (MQ=255)                                                                                                    tgtgGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTgg                                                >  6:285477/1‑149 (MQ=255)                                                                                                        gtgtACCAGTCGTCTTCCGGGGCCAGGCACGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGa                                            <  4:215521/149‑1 (MQ=255)                                                                                                        gtgtACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGa                                            <  5:285477/149‑1 (MQ=255)                                                                                                         tgtACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTggggg                                             <  4:125069/147‑1 (MQ=255)                                                                                                         tgtACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTggggg                                             >  3:125069/1‑147 (MQ=255)                                                                                                            aCCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAgcg                                         >  6:74328/1‑148 (MQ=255)                                                                                                             ccAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTacggctggtacaccacatcgaacgcaggccctacctggtggcgcaggtccagcccggcgtgcaactgctggtacgattgttgtttcagccctgcatagacccgctgtgg                                        <  1:162488‑M2/148‑110 (MQ=255)                                                                                                             ccAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTacggctggtacaccacatcgaacgcaggccctacctggtggcgcaggtccagcccggcgggcaactgctggtacgattgttgtttcagccctgcatagacccgctgtgg                                        <  1:167686‑M2/148‑110 (MQ=255)                                                                                                                gCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTacggctggtacaccacatcgaacgcaggccctacctggtggcgcaggtccagcccggcgtgcaactgctggtacgattgttgtttcagc                                                            >  6:148950‑M2/1‑36 (MQ=255)                                                                                                                gCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTacggctggtacaccacatcgaacgcaggccctacctggtggcgcaggtccagcccggcgtgcaactgctggtacgattgttgtttcagc                                                            <  5:148950‑M2/125‑90 (MQ=255)                                                                                                                gCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTc                                    <  6:274472/149‑1 (MQ=255)                                                                                                                  cGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCaa                                  <  8:259747/149‑1 (MQ=255)                                                                                                                    tCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACt                                >  6:202329/1‑149 (MQ=255)                                                                                                                        ccGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAAt                                                         >  4:291650/1‑120 (MQ=255)                                                                                                                        ccGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAAt                                                         <  3:291650/120‑1 (MQ=255)                                                                                                                        ccGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTc                               <  5:175133/146‑1 (MQ=255)                                                                                                                          ggggCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTa                          >  2:149113/1‑149 (MQ=255)                                                                                                                                  gCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCACCTCGACTATTCGGACg                  >  3:176178/1‑149 (MQ=255)                                                                                                                                   cAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGACGt                 >  3:24711/1‑149 (MQ=255)                                                                                                                                         gATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGAc                   <  4:23397/141‑1 (MQ=255)                                                                                                                                         gATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGAc                   >  3:23397/1‑141 (MQ=255)                                                                                                                                               gATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGACGTCGACCGCGATgc     >  3:265922/1‑149 (MQ=255)                                                                                                                                                   tACGGCTGGCCGCCATGCTCAGCTCCAAAGCCTTCCGGGAATACTTCGAGCCGCTCTGCCAACGCTTCGCTGAAATGGCGATGGTTGTTCAATGGGCATTGGGGGAGCGCAGTCAACTCGTCTATTGGGACGTCGACCGCGATGCGCt  <  8:284123/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GCCGTTGCCACAGCGGGTCTATGCAGGGCTGAAACAACAATCGTACCAGCAGTTGCACGCCGGGCTGGACCTGCGCCACCAGGTAGGGCCTGCGTTCGATGTGGTGTACCAGCCGTCTTCCGGGGCCAGGCAAGGGGATGAGGATGTACGGCTGGCCGCCATGCTCACCGCCAAAGGCTTCAGGGAATACTTCGAGCCGCACAGCCAACGCTTCGCTGAAATGGCGATGGTTGATCAATGGGCATTGGGGGAGCGCAGTCAACTCGACTATTCGGACGTCGACCGCGATGCGCT  >  NC_002947/3005435‑3005728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.