New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3613444 =	47 (0.870)	4 (0.080)	4/256	NT	7.1%	coding (240/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	3613484 =	59 (1.130)					coding (200/3396 nt)	mcoA	Mn(II) copper oxidase A

CGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACAGA  >  NC_002947/3613336‑3613632                                                                                                                                                     |                                                                                                                                                     catggcctctcccctcgacgacaacagcatgcccccgccaaccgacccgtcggcctacaccgaccagccggacgacccgacgtctgccttgcttgagctgaacaccatGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCa                                                                                                                                                      >  3:250204‑M1/109‑149 (MQ=255)  gcACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCAt                                                                                                                                                     <  5:293275/149‑1 (MQ=255)   cACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATg                                                                                                                                                    <  1:281240/149‑1 (MQ=255)   cACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATg                                                                                                                                                    <  8:159439/149‑1 (MQ=255)       ctctcccctcgacgacaacagcatgcccccgccaaccgacccgtcggcctacaccgaccagccggacgacccgacgtctgccttgcttgagctgaacaccatGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGgtgt                                                                                                                                                >  4:188548‑M1/103‑149 (MQ=255)         acaacGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTc                                                                                                                                              <  8:144714/149‑1 (MQ=255)                gCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaa                                                                                                                                       <  3:47870/149‑1 (MQ=255)                gCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaa                                                                                                                                       <  6:178668/149‑1 (MQ=255)                  tGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaag                                                                                                                                      >  4:196952/1‑148 (MQ=255)                  tGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaag                                                                                                                                      >  4:74813/1‑148 (MQ=255)                    ggTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTTCGGTCGCCATACACGCCATCGGCCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaagcaa                                                                                                                                   <  1:254207/149‑1 (MQ=255)                    ggTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaagcaa                                                                                                                                   <  6:32632/149‑1 (MQ=255)                     gTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaagcaag                                                                                                                                  <  6:239447/149‑1 (MQ=255)                     gTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaagcaag                                                                                                                                  >  8:294977/1‑149 (MQ=255)                             ttGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGt                                                                                                                          <  7:294977/149‑1 (MQ=255)                                       aCTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCgg                                                                                                                       >  6:61954/1‑142 (MQ=255)                                       aCTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCgg                                                                                                                       <  5:61954/142‑1 (MQ=255)                                         ttGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaa                                                                                                                                       <  5:218953/124‑1 (MQ=255)                                         ttGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTcaa                                                                                                                                       >  6:218953/1‑124 (MQ=255)                                           gTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCt                                                                                                            >  1:156448/1‑149 (MQ=255)                                            tCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCggg                                                                                                                      >  4:324785/1‑138 (MQ=255)                                            tCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCggg                                                                                                                      <  3:324785/138‑1 (MQ=255)                                            tCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGCTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTg                                                                                                           >  5:274386/1‑149 (MQ=255)                                              cGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGt                                                                                                         >  1:34834/1‑149 (MQ=255)                                                   tttGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGgtg                                                                                                    >  4:59333/1‑149 (MQ=255)                                                      gcagggtaggTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAg                                                                                                 >  7:87209/1‑149 (MQ=255)                                                       cagggcaggTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAgg                                                                                                <  3:74813/149‑1 (MQ=255)                                                       cagggcaggTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAg                                                                                                 <  3:196952/148‑1 (MQ=255)                                                                  gcagcaCGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCg                                                                                     >  4:54041/1‑149 (MQ=255)                                                                      caCGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGACTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTg                                                                                 >  3:188388/1‑149 (MQ=255)                                                                        cGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGc                                                                               >  5:69018/1‑149 (MQ=255)                                                                               ggTGCGGACTTTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGc                                                                         <  8:87209/148‑1 (MQ=255)                                                                                gTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCAt                                                                       >  8:144060/1‑149 (MQ=255)                                                                                      aCTGTGTTGCGGTCGCCATAGAGGCCAGCGGTCAACTCCCGCGAGGCTTCGTTGGCCTCTGGCATGGTTTTCAGCTGAAGCAATGCAGACGTCGGGGCGTCCGGCTGGTCGGGGTAGGCCGTCGGGTCGGTTGTCGTGGGCATGCtgtt                                                                 <  8:68148/149‑1 (MQ=255)                                                                                      aCTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCCGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCtgtt                                                                 <  7:144060/149‑1 (MQ=255)                                                                                       cTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCtgttg                                                                <  2:156448/149‑1 (MQ=255)                                                                                        tgtgTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCgggt                                                                           <  6:257795/137‑2 (MQ=255)                                                                                        tgtgTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCgggt                                                                           >  5:257795/1‑136 (MQ=255)                                                                                          tgtTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTgtcg                                                             >  1:105118/1‑149 (MQ=255)                                                                                          tgtTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGACTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTgtc                                                              <  4:188388/148‑1 (MQ=255)                                                                                                      acaccatgccagaggccaacgaaggctcgctggagttgaccgatggcATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGagag                                                 >  4:188548‑M2/48‑149 (MQ=255)                                                                                                          cacGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCa                                             >  4:210655/1‑149 (MQ=255)                                                                                                            tgccagaggccaacgaaggctcgctggagttgaccgatggcATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATg                                           >  3:250204‑M2/42‑149 (MQ=255)                                                                                                            ctccATCGTTCAACTCCATCGAGCCTTCGTTGGCCTCTGGCTTGGTGTTGAGGTGTTTCAAGGGAGAAGTCTGGTGGTCCGGGTGGTCGGTGTAGGGCGACGGGTCGGTTGGCGGGGGGATGCTGTTGTCGTCGAGGGGAGAGGGCAt                                            <  2:148599/146‑1 (MQ=255)                                                                                                             GCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCtgtt                                                                 >  7:249315‑M1/1‑126 (MQ=255)                                                                                                             GCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCtgtt                                                                 <  8:249315‑M1/126‑1 (MQ=255)                                                                                                              ccagaggccaacgaaggctcgctggagttgaccgatggcATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATgg                                          <  3:188548‑M2/109‑1 (MQ=255)                                                                                                               CATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGAGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTCTTGTCGTCGAGGGGAGAGGCCAt                                            <  1:148599‑M1/145‑1 (MQ=255)                                                                                                                   ggTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGa                                    <  6:69018/149‑1 (MQ=255)                                                                                                                    gTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGa                                    >  8:91781/1‑148 (MQ=255)                                                                                                                     tCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGt                                                                                       >  8:179319/1‑96 (MQ=255)                                                                                                                     tCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGt                                                                                       <  7:179319/96‑1 (MQ=255)                                                                                                                     tCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGagag                                                 >  5:285415/1‑134 (MQ=255)                                                                                                                     tCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGagag                                                 <  6:285415/134‑1 (MQ=255)                                                                                                                     tCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGAt                                   >  2:64749/1‑148 (MQ=255)                                                                                                                       aaCTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAggg                                                      <  3:51354/127‑1 (MQ=255)                                                                                                                       aaCTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAggg                                                      >  4:51354/1‑127 (MQ=255)                                                                                                                         cTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAgg                                                       <  2:161097/124‑1 (MQ=255)                                                                                                                         cTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAgg                                                       >  1:161097/1‑124 (MQ=255)                                                                                                                         cTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAAcc                              >  3:34372/1‑149 (MQ=255)                                                                                                                         cTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAAcc                              >  8:237838/1‑149 (MQ=255)                                                                                                                           aaggctcgctggagttgaccgatggcATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCg                            <  4:250204‑M2/123‑1 (MQ=255)                                                                                                                            cAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCa                                             <  2:336575/131‑1 (MQ=255)                                                                                                                            cAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCa                                             >  1:336575/1‑131 (MQ=255)                                                                                                                            cAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGa                           <  7:91781/149‑1 (MQ=255)                                                                                                                                   ccTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGat                    <  3:210655/149‑1 (MQ=255)                                                                                                                                       cGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGatcat                 <  7:237838/148‑1 (MQ=255)                                                                                                                                       cGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGatcat                 >  8:137183/1‑148 (MQ=255)                                                                                                                                        gTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGTGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGatcat                 >  4:103167/1‑147 (MQ=255)                                                                                                                                         ttGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGc                                         <  3:324228/122‑1 (MQ=255)                                                                                                                                         ttGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGc                                         >  4:324228/1‑122 (MQ=255)                                                                                                                                             ccTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATcagtg            >  3:127940/1‑147 (MQ=255)                                                                                                                                              ctctGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAg                                                                                                 >  5:343970/1‑61 (MQ=255)                                                                                                                                              ctctGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAg                                                                                                 <  6:343970/61‑1 (MQ=255)                                                                                                                                               tctGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATcagtgcagt        >  7:93205/1‑149 (MQ=255)                                                                                                                                                   gcATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGTCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGAc     <  1:64749‑M2/146‑1 (MQ=255)                                                                                                                                                     aTGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACaga  <  2:34834/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGCGGACTGTGTTGCGGTCGCCATACACGCCATCGGTCAACTCCAGCGAGCCTTCGTTGGCCTCTGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACAGA  >  NC_002947/3613336‑3613632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.