New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4721005 =	41 (0.760)	4 (0.080)	4/254	NT	9.3%	coding (591/726 nt)	PP_4178	dienelactone hydrolase family protein
	?	NC_002947	4721065 =	39 (0.750)					coding (531/726 nt)	PP_4178	dienelactone hydrolase family protein

TCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAGTTCCAAGGCA  >  NC_002947/4720918‑4721212                                                                                                                                                    |                                                                                                                                                    ctggacacgccgaatcctgaagatgccaagcgcatcaagggctcggtgctggtgttgcatggtgcctccgatccattggtgcctaaaGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCtt                                                                                                                                                    >  8:21045‑M1/88‑149 (MQ=255)   gctcgGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTa                                                                                                                                                  <  3:295141/149‑1 (MQ=255)   gctcgGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTa                                                                                                                                                  <  2:278622/149‑1 (MQ=255)   gctcgGAAGTGCGCCGGTCATACTGCATCTTGCCCCGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGTGCACCTGCCAGTCCACCTTGGCCGCGGTCATCTCGTCTTCGAATGCCGGCAGCTGCTCttt                                                                                                                                                   <  8:145063/148‑1 (MQ=255)    gacacgccgaatcctgaagatgccaagcgcatcaagggctcggtgctggtgttgcatggtgcctccgatccattggtgcctaaaGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAg                                                                                                                                                 >  1:319138‑M1/85‑149 (MQ=255)       ggAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGc                                                                                                                                               <  4:56590/148‑1 (MQ=255)            tGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAAt                                                                                                                                         <  4:173840/149‑1 (MQ=255)                   gTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCgg                                                                                                                                  <  4:259640/149‑1 (MQ=255)                     cATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAg                                                                                                                                >  7:261756/1‑149 (MQ=255)                       tACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAgg                                                                                                                               >  6:46546/1‑148 (MQ=255)                          tGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCAc                                                                                                                            >  5:272099/1‑148 (MQ=255)                                  gCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGc                                                                                                                       <  8:235902/145‑1 (MQ=255)                                     cGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCa                                                                                                                >  4:271140/1‑149 (MQ=255)                                           atTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATTGATCGGAGGCCACATGCAACAACAGCAcc                                                                                                           >  4:201934/1‑148 (MQ=255)                                            ttGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCTGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGa                                                                                                         >  2:101380/1‑149 (MQ=255)                                            ttGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCAcc                                                                                                           >  1:319047/1‑147 (MQ=255)                                             tGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCgg                                                                                                                                  >  2:112669/1‑123 (MQ=255)                                             tGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCgg                                                                                                                                  <  1:112669/123‑1 (MQ=255)                                              ggCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAg                                                                                                        <  7:11645/148‑1 (MQ=255)                                                  ttCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCtt                                                                                                   >  6:10556/1‑149 (MQ=255)                                                     cgcgcGGTACACGAGGGCCCCGCGCCCCCGTAACCGACCAACTGCCCGGCCCCCTTGGCCGCGTCCAGCTCGTCTTCGAATGCCGGCAGCTCCTCTTTAGGCACCAATGCCTCGGAGGCACCATGCAACACCACCACCGAGCCCTTg                                                                                                  <  6:272099/143‑1 (MQ=255)                                                       gTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCgg                                                                                                                                  <  6:102849/113‑1 (MQ=255)                                                       gTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCgg                                                                                                                                  >  5:102849/1‑113 (MQ=255)                                                       gTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATgc                                                                                              <  5:46546/149‑1 (MQ=255)                                                           gTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCtt                                                                                          >  7:76067/1‑149 (MQ=255)                                                              aaCGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATTCAACACCAGCACCGAGCCCTTGATGCGCTTgg                                                                                        <  1:40004/148‑1 (MQ=255)                                                                      cACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCa                                                                                <  3:271140/148‑1 (MQ=255)                                                                       aCCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCCTCTTCGAATGCCGGCAGCTGCTCTTTAGGCCACAATGCATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCATCGCATCTTCAg                                                                               >  5:269742/1‑148 (MQ=255)                                                                          gcgcCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGAtt                                                                           <  2:319047/149‑1 (MQ=255)                                                                                   ctaaagagcagctgccggcattcgaagacgagatgaacgcggccaaggtggactggcagttgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTc                                                                  >  1:319138‑M2/66‑149 (MQ=255)                                                                                     aCTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCa                                                                <  5:10556/149‑1 (MQ=255)                                                                                      aagagcagctgccggcattcgaagacgagatgaacgcggccaaggtggactggcagttgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAg                                                               >  8:21045‑M2/63‑149 (MQ=255)                                                                                       tGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAgg                                                              >  7:138455/1‑149 (MQ=255)                                                                                       tGACCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAgg                                                              <  3:201934/149‑1 (MQ=255)                                                                                          gcagctgccggcattcgaagacgagatgaacgcggccaaggtggactggcagttgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTg                                                           >  3:154151‑M2/59‑149 (MQ=255)                                                                                            AACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGcc                                                         <  6:150349‑M1/149‑1 (MQ=255)                                                                                            AACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGcc                                                         <  6:155261‑M1/149‑1 (MQ=255)                                                                                                    gTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCTGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACAGAGCCATTGATGAGATTGGCATCTTCAGCATTCCGCGTGTCCAGGGTGCAGTGGAAc                                                  >  5:334071/1‑148 (MQ=255)                                                                                                                 gcgTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCcgcacg                                    >  8:53395/1‑149 (MQ=255)                                                                                                                       aTCTCGTCTTCGAATGCCGTCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTc                              <  8:261756/149‑1 (MQ=255)                                                                                                                       aTCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTc                              >  6:146434/1‑149 (MQ=255)                                                                                                                        tctcGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCt                                                                                                    <  1:250011/78‑1 (MQ=255)                                                                                                                        tctcGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCt                                                                                                    >  2:250011/1‑78 (MQ=255)                                                                                                                        tctcGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCg                             >  7:78734/1‑149 (MQ=255)                                                                                                                            gccaaggtggactggcagttgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGgcgc                         <  2:319138‑M2/125‑1 (MQ=255)                                                                                                                            gTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGgcgc                         <  4:92453/149‑1 (MQ=255)                                                                                                                                 cGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGcgccgc                      <  5:150349/147‑1 (MQ=255)                                                                                                                                 cGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGcgccgc                      <  5:155261/147‑1 (MQ=255)                                                                                                                                  gAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTAc                   <  8:76067/149‑1 (MQ=255)                                                                                                                                        cGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACgggg               >  5:75985/1‑146 (MQ=255)                                                                                                                                          gcagttgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAg            <  7:21045‑M2/138‑1 (MQ=255)                                                                                                                                          gCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCa             <  1:101380/147‑1 (MQ=255)                                                                                                                                            aGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAGTTc         <  5:146434/149‑1 (MQ=255)                                                                                                                                               tgctcTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAGTTCCaa      <  8:138455‑M2/144‑1 (MQ=255)                                                                                                                                                   cTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACgg                                           <  4:270575‑M2/107‑1 (MQ=255)                                                                                                                                                   cTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACgg                                           >  3:270575‑M2/2‑108 (MQ=255)                                                                                                                                                    tttAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAGTTCCAAGGca  >  6:230840/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGTAACTGAGCAACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCCGCACGCAGGTCGGCGCCGCTACGGGCCAGTTCCAAGGCA  >  NC_002947/4720918‑4721212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.